RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 SGK1O00141 431 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 RTN2O75298 545 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 KRT36O76013 467 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 TUBP50607 506 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 DDB1Q16531 1140 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 BBS9Q3SYG4 887 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 RHOT2Q8IXI1 618 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 FAM13CQ8NE31 585 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 FBXO41Q8TF61 875 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 CPA5Q8WXQ8 436 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 HAS1Q92839 578 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 HES6Q96HZ4 224 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 MTMR9Q96QG7 549 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 ANKRD2Q9GZV1 360 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 RNPEPL1Q9HAU8 725 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 PPARGC1AQ9UBK2 798 aaKnown RBP11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 PNMA6FA0A0J9YX94 578 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 CIB2O75838 187 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 PECAM1P16284 738 aaPredicted RBP11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 ARHGAP4P98171 946 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 BNIP1Q12981 228 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 PPP2R5CQ13362 524 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 GIT2Q14161 759 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 MPP2Q14168 576 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 P3H1Q32P28 736 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 LVRNQ6Q4G3 990 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 PALM2Q8IXS6 379 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 SYT2Q8N9I0 419 aaPredicted RBP11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 STK32AQ8WU08 396 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 SYT15Q9BQS2 421 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 ZSWIM1Q9BR11 485 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 PAGR1Q9BTK6 254 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 SPZ1Q9BXG8 430 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 STK33Q9BYT3 514 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 TMEM59LQ9UK28 342 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 CORO1CQ9ULV4 474 aaPredicted RBP11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 GNPATO15228 680 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 HAUS5O94927 633 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 UNC5CO95185 931 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 GDF11O95390 407 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 ENO1P06733 434 aaKnown RBP11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 ABL2P42684 1182 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 PEX5P50542 639 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 CACNA2D1P54289 1103 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 CUL3Q13618 768 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 BLMHQ13867 455 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 PPP1R15BQ5SWA1 713 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 ZDHHC24Q6UX98 284 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 SNRNP27Q8WVK2 155 aaKnown RBP11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 SCG3Q8WXD2 468 aaKnown RBP11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 C10orf88Q9H8K7 445 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 JMJD4Q9H9V9 463 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 HEY2Q9UBP5 337 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 MYH7P12883 1935 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 GAS7O60861 476 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 CDH16O75309 829 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 DCTN3O75935 186 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 LINGO3P0C6S8 592 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 ZSCAN5DPP0CG00 497 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 BMP3P12645 472 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 KRT10P13645 584 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 MARK3P27448 753 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 SERPINB6P35237 376 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 MRPS35P82673 323 aaKnown RBP11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 KPNB1Q14974 876 aaKnown RBP11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 EPHA7Q15375 998 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 PI4K2AQ9BTU6 479 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 PARVGQ9HBI0 331 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 CYP4F11Q9HBI6 524 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 APEX2Q9UBZ4 518 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 AGTPBP1Q9UPW5 1226 aa11.09□□□□□ -0.63
PRPF38B-201ENST00000370021 KCNQ2O43526 872 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 BANF1O75531 89 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 TTLL1O95922 423 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 PYGLP06737 847 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 ATXN3P54252 364 aaPredicted RBP11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 COG7P83436 770 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 GPS1Q13098 491 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 TMED1Q13445 227 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 RRP1BQ14684 758 aaKnown RBP11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 PKN2Q16513 984 aaKnown RBP11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 QRICH1Q2TAL8 776 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 PHLDB3Q6NSJ2 640 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 NLRP9Q7RTR0 991 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 CCDC125Q86Z20 511 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 PIP4K2CQ8TBX8 421 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 DHX38Q92620 1227 aaKnown RBP11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 SNF8Q96H20 258 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 TMEM117Q9H0C3 514 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 GINM1Q9NU53 330 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 C4AP0C0L4 1744 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 C4BP0C0L5 1744 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 MIF4GDA9UHW6 222 aaKnown RBP11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 KRT4P19013 534 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 HSPA1LP34931 641 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 BTKQ06187 659 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 PDIA2Q13087 525 aaKnown RBP11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 NFIXQ14938 502 aa11.08□□□□□ -0.64
PRPF38B-201ENST00000370021 NKX1-1Q15270 411 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms