RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.63□□□□□ -0.87
SNX27-201ENST00000368838 MRPL38Q96DV4 380 aaKnown RBP9.63□□□□□ -0.87
SNX27-201ENST00000368838 CEP89Q96ST8 783 aa9.63□□□□□ -0.87
SNX27-201ENST00000368838 JPH2Q9BR39 696 aaPredicted RBP9.63□□□□□ -0.87
SNX27-201ENST00000368838 RUSC1Q9BVN2 902 aa9.63□□□□□ -0.87
SNX27-201ENST00000368838 DHX33Q9H6R0 707 aaKnown RBP9.63□□□□□ -0.87
SNX27-201ENST00000368838 TMEM206Q9H813 350 aa9.63□□□□□ -0.87
SNX27-201ENST00000368838 AGO3Q9H9G7 860 aaKnown RBP9.63□□□□□ -0.87
SNX27-201ENST00000368838 SAMSN1Q9NSI8 373 aaKnown RBP9.63□□□□□ -0.87
SNX27-201ENST00000368838 ERAP1Q9NZ08 941 aa9.63□□□□□ -0.87
SNX27-201ENST00000368838 LMCD1Q9NZU5 365 aa9.63□□□□□ -0.87
SNX27-201ENST00000368838 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 IGKV6-21A0A0C4DH24 114 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 H3BNC9 293 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 ENPP3O14638 875 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 SPTLC1O15269 473 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 GRM6O15303 877 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 CHMP2AO43633 222 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 CAND2O75155 1236 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 KRT18P05783 430 aaKnown RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 ATP1A3P13637 1013 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 PLS3P13797 630 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 NDUFV2P19404 249 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 RPL13P26373 211 aaKnown RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 CD52P31358 61 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 NCKAP1LP55160 1127 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 MRPS6P82932 125 aaKnown RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 POU5F1BQ06416 359 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 TBX2Q13207 712 aaPredicted RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 HSP90AA2PQ14568 343 aaPredicted RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 ARID5BQ14865 1188 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 FILIP1LQ4L180 1135 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 PAN2Q504Q3 1202 aaKnown RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 FBXO47Q5MNV8 452 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 ANKRD40Q6AI12 368 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 PTCRAQ6ISU1 281 aaPredicted RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 TRMT1LQ7Z2T5 733 aaKnown RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 VSTM4Q8IW00 320 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 CCDC60Q8IWA6 550 aaPredicted RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 SMYD4Q8IYR2 804 aaPredicted RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 CSGALNACT2Q8N6G5 542 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 PIGOQ8TEQ8 1089 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 LINC01599Q8WXQ3 324 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 TRIM44Q96DX7 344 aaPredicted RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 PPP1R16BQ96T49 567 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 TSG101Q99816 390 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 LRFN3Q9BTN0 628 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 C1QTNF1Q9BXJ1 281 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 XPO4Q9C0E2 1151 aaKnown RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 SMARCAD1Q9H4L7 1026 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 SLC39A2Q9NP94 309 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 ZNF302Q9NR11 478 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 CYP26B1Q9NR63 512 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 KCND1Q9NSA2 647 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 NRBP2Q9NSY0 501 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 TYW1Q9NV66 732 aaKnown RBP9.62□□□□□ -0.87
SNX27-201ENST00000368838 SAMM50Q9Y512 469 aa9.62□□□□□ -0.87
SNX27-201ENST00000368838 KIAA0391O15091 583 aaKnown RBP9.61□□□□□ -0.87
SNX27-201ENST00000368838 SLC16A3O15427 465 aaKnown RBP9.61□□□□□ -0.87
SNX27-201ENST00000368838 FAM13AO94988 1023 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 SERPINC1P01008 464 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 CDK11BP21127 795 aaKnown RBP9.61□□□□□ -0.87
SNX27-201ENST00000368838 GTF2F1P35269 517 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNX27-201ENST00000368838 DNM2P50570 870 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 STAT5BP51692 787 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 PMS1P54277 932 aaKnown RBP9.61□□□□□ -0.87
SNX27-201ENST00000368838 TRIM14Q14142 442 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 BTG3Q14201 252 aaPredicted RBP9.61□□□□□ -0.87
SNX27-201ENST00000368838 PLCB4Q15147 1175 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 UGCGQ16739 394 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 PTPROQ16827 1216 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 LEXMQ3ZCV2 418 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 SWSAP1Q6NVH7 229 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 TAF2Q6P1X5 1199 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 RTN4RL1Q86UN2 441 aaPredicted RBP9.61□□□□□ -0.87
SNX27-201ENST00000368838 ZNF710Q8N1W2 664 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 APBB2Q92870 758 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 ERGIC2Q96RQ1 377 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 EDEM3Q9BZQ6 932 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 IGFLR1Q9H665 355 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 METTL14Q9HCE5 456 aaKnown RBP9.61□□□□□ -0.87
SNX27-201ENST00000368838 ALG13Q9NP73 1137 aaKnown RBP9.61□□□□□ -0.87
SNX27-201ENST00000368838 C11orf16Q9NQ32 467 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 DMAC2Q9NW81 257 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 CLDND1Q9NY35 253 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 IFNKQ9P0W0 207 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 GABBR1Q9UBS5 961 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 CTNND2Q9UQB3 1225 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 GINS2Q9Y248 185 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 ZKSCAN5Q9Y2L8 839 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 DAAM1Q9Y4D1 1078 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 MUC6Q6W4X9 2439 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 ADGRA3Q8IWK6 1321 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 COL1A2P08123 1366 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 MYO10Q9HD67 2058 aa9.61□□□□□ -0.87
SNX27-201ENST00000368838 MBLAC1A4D2B0 266 aaPredicted RBP9.6□□□□□ -0.87
SNX27-201ENST00000368838 LGALS16A8MUM7 142 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 KCNJ18B7U540 433 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 PMM2O15305 246 aa9.6□□□□□ -0.87
SNX27-201ENST00000368838 LINC01565O15544 149 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms