RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 CELSR3Q9NYQ7 3312 aa11.73□□□□□ -0.53
TUBE1-201ENST00000368657 DNMT3BQ9UBC3 853 aaKnown RBP11.73□□□□□ -0.53
TUBE1-201ENST00000368657 CFAP46Q8IYW2 2715 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 BACH1O14867 736 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 ZNF263O14978 683 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 ATG13O75143 517 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 C8AP07357 584 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 RLBP1P12271 317 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 OR1G1P47890 313 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 PXNP49023 591 aaPredicted RBP11.72□□□□□ -0.53
TUBE1-201ENST00000368657 IRX4P78413 519 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 SEMA3BQ13214 749 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 KARSQ15046 597 aaKnown RBP11.72□□□□□ -0.53
TUBE1-201ENST00000368657 ARSIQ5FYB1 569 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 VPS53Q5VIR6 699 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 EFCAB12Q6NXP0 572 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 Q6ZS52 159 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 CSGALNACT1Q8TDX6 532 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 PANK1Q8TE04 598 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 DEPDC1BQ8WUY9 529 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 ING5Q8WYH8 240 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
TUBE1-201ENST00000368657 ZSCAN10Q96SZ4 725 aaPredicted RBP11.72□□□□□ -0.53
TUBE1-201ENST00000368657 COLEC11Q9BWP8 271 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 CEP131Q9UPN4 1083 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 SLC8A2Q9UPR5 921 aa11.72□□□□□ -0.53
TUBE1-201ENST00000368657 ASCC3Q8N3C0 2202 aaKnown RBP11.71□□□□□ -0.53
TUBE1-201ENST00000368657 CNTNAP2Q9UHC6 1331 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 MEIS3P2A8K0S8 358 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 MEIS2O14770 477 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 MEFVO15553 781 aaPredicted RBP11.71□□□□□ -0.53
TUBE1-201ENST00000368657 FGFR4P22455 802 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 GPC3P51654 580 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 ABHD15Q6UXT9 468 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 COLGALT2Q8IYK4 626 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 SCLT1Q96NL6 688 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 INO80BQ9C086 356 aaPredicted RBP11.71□□□□□ -0.53
TUBE1-201ENST00000368657 ZNF302Q9NR11 478 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 KCNH7Q9NS40 1196 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 MAD2L2Q9UI95 211 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 RCAN3Q9UKA8 241 aa11.71□□□□□ -0.53
TUBE1-201ENST00000368657 PRG3Q9Y2Y8 225 aaPredicted RBP11.71□□□□□ -0.53
TUBE1-201ENST00000368657 WDR81Q562E7 1941 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 CCDC194A0A1B0GVG4 234 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 PALM3A6NDB9 673 aaPredicted RBP11.7□□□□□ -0.54
TUBE1-201ENST00000368657 EXTL3O43909 919 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 ZNF862O60290 1169 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 MICAL2O94851 1124 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 RPL17P18621 184 aaKnown RBP11.7□□□□□ -0.54
TUBE1-201ENST00000368657 FCARP24071 287 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 HOXC13P31276 330 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 CLCN3P51790 818 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 CFHR1Q03591 330 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 MRPL10Q7Z7H8 261 aaKnown RBP11.7□□□□□ -0.54
TUBE1-201ENST00000368657 C11orf74Q86VG3 221 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 RALGPS2Q86X27 583 aaPredicted RBP11.7□□□□□ -0.54
TUBE1-201ENST00000368657 SIRT2Q8IXJ6 389 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 CKAP2LQ8IYA6 745 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 ENAHQ8N8S7 591 aaPredicted RBP11.7□□□□□ -0.54
TUBE1-201ENST00000368657 ADAMTS14Q8WXS8 1223 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 GCOM2Q9BZD3 368 aaPredicted RBP11.7□□□□□ -0.54
TUBE1-201ENST00000368657 RSAD1Q9HA92 442 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 UBN1Q9NPG3 1134 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 HCFC1R1Q9NWW0 138 aa11.7□□□□□ -0.54
TUBE1-201ENST00000368657 EVLQ9UI08 416 aaPredicted RBP11.7□□□□□ -0.54
TUBE1-201ENST00000368657 ZMYM6O95789 1325 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 POMCP01189 267 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 ATP4AP20648 1035 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 SFPQP23246 707 aaKnown RBP eCLIP11.69□□□□□ -0.54
TUBE1-201ENST00000368657 ABCG1P45844 678 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 KPNA1P52294 538 aaPredicted RBP11.69□□□□□ -0.54
TUBE1-201ENST00000368657 HAND2P61296 217 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 CCINQ13939 588 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 FAM78AQ5JUQ0 283 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 MFSD6LQ8IWD5 586 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 LINC01465Q8N7H1 131 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 FAM200AQ8TCP9 573 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 NLRP7Q8WX94 980 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 CRELD1Q96HD1 420 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 NUSAP1Q9BXS6 441 aaKnown RBP11.69□□□□□ -0.54
TUBE1-201ENST00000368657 PCDHB2Q9Y5E7 798 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 APC2O95996 2303 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 NOTCH4Q99466 2003 aa11.69□□□□□ -0.54
TUBE1-201ENST00000368657 MYBPHLA2RUH7 354 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 RHOP08100 348 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 MS4A1P11836 297 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 PTPN2P17706 415 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 AFF1P51825 1210 aaKnown RBP11.68□□□□□ -0.54
TUBE1-201ENST00000368657 AXDND1Q5T1B0 1012 aaPredicted RBP11.68□□□□□ -0.54
TUBE1-201ENST00000368657 SWSAP1Q6NVH7 229 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 MIS18BP1Q6P0N0 1132 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 FUT10Q6P4F1 479 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 VITQ6UXI7 678 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 E2F7Q96AV8 911 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 ZNF668Q96K58 619 aaPredicted RBP11.68□□□□□ -0.54
TUBE1-201ENST00000368657 B3GALT6Q96L58 329 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 ASB16Q96NS5 453 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 CLSTN3Q9BQT9 956 aa11.68□□□□□ -0.54
TUBE1-201ENST00000368657 MXRA8Q9BRK3 442 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms