RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 IQCDQ96DY2 449 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 MAML3Q96JK9 1138 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 OSBPL9Q96SU4 736 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 MPHOSPH6Q99547 160 aaKnown RBP11.5□□□□□ -0.57
TPM3-212ENST00000368533 GOLGA6AQ9NYA3 693 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 DYNC1LI2O43237 492 aaPredicted RBP11.49□□□□□ -0.57
TPM3-212ENST00000368533 GNA14O95837 355 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 ZBTB48P10074 688 aaPredicted RBP11.49□□□□□ -0.57
TPM3-212ENST00000368533 PON1P27169 355 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 ATP1A2P50993 1020 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 E2F5Q15329 346 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 FAM160B1Q5W0V3 765 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 TAPT1Q6NXT6 567 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 RNF149Q8NC42 400 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 SCFD2Q8WU76 684 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 BAP1Q92560 729 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 CALR3Q96L12 384 aaKnown RBP11.49□□□□□ -0.57
TPM3-212ENST00000368533 TCHPQ9BT92 498 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 SELENOOQ9BVL4 669 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 ACP6Q9NPH0 428 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 HYOU1Q9Y4L1 999 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 LAMA3Q16787 3333 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 TMCO5BA8MYB1 307 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 PPP1R12AO14974 1030 aaPredicted RBP11.49□□□□□ -0.57
TPM3-212ENST00000368533 ZEB2O60315 1214 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 TLR2O60603 784 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 FTCDO95954 541 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 RPSAP08865 295 aaKnown RBP11.49□□□□□ -0.57
TPM3-212ENST00000368533 SMPD1P17405 629 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 LIG4P49917 911 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 WNT7BP56706 349 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 GTF2BQ00403 316 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 CDK17Q00537 523 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 KLHL30Q0D2K2 578 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 CRHR2Q13324 411 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 PDCLQ13371 301 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 PLCB4Q15147 1175 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 RNF187Q5TA31 235 aaPredicted RBP11.49□□□□□ -0.57
TPM3-212ENST00000368533 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 RDM1Q8NG50 284 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 KAT5Q92993 513 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 MS4A14Q96JA4 679 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 PI4K2AQ9BTU6 479 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 FAM107BQ9H098 131 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 LUC7LQ9NQ29 371 aaKnown RBP11.49□□□□□ -0.57
TPM3-212ENST00000368533 NRBP2Q9NSY0 501 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 ADAMTS1Q9UHI8 967 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 MYH10P35580 1976 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 ASB14A6NK59 587 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 AGPSO00116 658 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 AOC2O75106 756 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 ATG7O95352 703 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 VTNP04004 478 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 NCKAP1LP55160 1127 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 FKBP1BP68106 108 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 BFSP1Q12934 665 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 CAPSQ13938 189 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 CCNI2Q6ZMN8 369 aaPredicted RBP11.49□□□□□ -0.57
TPM3-212ENST00000368533 OTUD6BQ8N6M0 293 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 XXYLT1Q8NBI6 393 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 MCPH1Q8NEM0 835 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 SPATA4Q8NEY3 305 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 KIFAP3Q92845 792 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 STRA6Q9BX79 667 aa11.49□□□□□ -0.57
TPM3-212ENST00000368533 DMGDHQ9UI17 866 aaKnown RBP11.49□□□□□ -0.57
TPM3-212ENST00000368533 K7ERI5 159 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 GFPT2O94808 682 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 MAPTP10636 758 aaKnown RBP11.48□□□□□ -0.57
TPM3-212ENST00000368533 KRT13P13646 458 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 UCHL3P15374 230 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 TCP1P17987 556 aaKnown RBP11.48□□□□□ -0.57
TPM3-212ENST00000368533 FGFR4P22455 802 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 GCLCP48506 637 aaPredicted RBP11.48□□□□□ -0.57
TPM3-212ENST00000368533 FMO5P49326 533 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 BEX3Q00994 111 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 ARHGAP1Q07960 439 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
TPM3-212ENST00000368533 SNRNP35Q16560 246 aaKnown RBP11.48□□□□□ -0.57
TPM3-212ENST00000368533 FAM110CQ1W6H9 321 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 KIAA0753Q2KHM9 967 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 CREG2Q8IUH2 290 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 RUFY1Q96T51 708 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 CAPS2Q9BXY5 557 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 RNF19AQ9NV58 838 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 SEPT11Q9NVA2 429 aaKnown RBP11.48□□□□□ -0.57
TPM3-212ENST00000368533 SALL4Q9UJQ4 1053 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 PACSIN2Q9UNF0 486 aaPredicted RBP11.48□□□□□ -0.57
TPM3-212ENST00000368533 GOLGA6BA6NDN3 693 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 INO80B-WBP1J3KQ70 363 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 NDUFAB1O14561 156 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 TGFB3P10600 412 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 CTGFP29279 349 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 MYL7Q01449 175 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 KCTD16Q68DU8 428 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 C8orf74Q6P047 294 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 IFT81Q8WYA0 676 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 SCLT1Q96NL6 688 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 TINF2Q9BSI4 451 aa11.48□□□□□ -0.57
TPM3-212ENST00000368533 INO80BQ9C086 356 aaPredicted RBP11.48□□□□□ -0.57
TPM3-212ENST00000368533 DHX33Q9H6R0 707 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms