RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 BCAS3Q9H6U6 928 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 TMEM134Q9H6X4 195 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 TMBIM4Q9HC24 238 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 POLD4Q9HCU8 107 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 OSGEPQ9NPF4 335 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 NRBP2Q9NSY0 501 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 ZNF214Q9UL59 606 aaPredicted RBP10.98□□□□□ -0.65
TPM3-209ENST00000368527 PLAAQ9Y263 795 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 PCDHB2Q9Y5E7 798 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 CD2APQ9Y5K6 639 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 LOC102724159A0A0B4J2E5 919 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 SPOPO43791 374 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 ATP9AO75110 1047 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 STBD1O95210 358 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 ATG7O95352 703 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 ADRB2P07550 413 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 NUDT17P0C025 328 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 FAM153BP0C7A2 387 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 TGFB3P10600 412 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 CHRNB2P17787 502 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 ADSSP30520 456 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 HSD17B3P37058 310 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 USP8P40818 1118 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 LIG4P49917 911 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 GUCY2FP51841 1108 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 EFNA5P52803 228 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 POLGP54098 1239 aaPredicted RBP10.97□□□□□ -0.65
TPM3-209ENST00000368527 ACTR2P61160 394 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 GNGT1P63211 74 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 PRKCEQ02156 737 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 MAP2K1Q02750 393 aaPredicted RBP10.97□□□□□ -0.65
TPM3-209ENST00000368527 CAV1Q03135 178 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 PRPF4BQ13523 1007 aaKnown RBP10.97□□□□□ -0.65
TPM3-209ENST00000368527 PWP2Q15269 919 aaKnown RBP10.97□□□□□ -0.65
TPM3-209ENST00000368527 CLEC16AQ2KHT3 1053 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 FAM153CQ494X1 144 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 TTMPQ5BVD1 217 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 FAM160B1Q5W0V3 765 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 KCNV1Q6PIU1 500 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.97□□□□□ -0.65
TPM3-209ENST00000368527 TMC3Q7Z5M5 1100 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 SRLQ86TD4 932 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 NOP9Q86U38 636 aaKnown RBP10.97□□□□□ -0.65
TPM3-209ENST00000368527 CBWD2Q8IUF1 395 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 HELQQ8TDG4 1101 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 GRK7Q8WTQ7 553 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 RIN2Q8WYP3 895 aaPredicted RBP10.97□□□□□ -0.65
TPM3-209ENST00000368527 CD101Q93033 1021 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 ZNF653Q96CK0 615 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 KREMEN1Q96MU8 473 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 FNBP1Q96RU3 617 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 WRNIP1Q96S55 665 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 JPH2Q9BR39 696 aaPredicted RBP10.97□□□□□ -0.65
TPM3-209ENST00000368527 PAGR1Q9BTK6 254 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 NIFKQ9BYG3 293 aaKnown RBP10.97□□□□□ -0.65
TPM3-209ENST00000368527 MTFR1LQ9H019 292 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 MRPL47Q9HD33 250 aaKnown RBP10.97□□□□□ -0.65
TPM3-209ENST00000368527 CYP39A1Q9NYL5 469 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 AMACRQ9UHK6 382 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 FAM153AQ9UHL3 310 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 RRP15Q9Y3B9 282 aaKnown RBP10.97□□□□□ -0.65
TPM3-209ENST00000368527 PASKQ96RG2 1323 aa10.97□□□□□ -0.65
TPM3-209ENST00000368527 PHIPQ8WWQ0 1821 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 SSC5DA1L4H1 1573 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 ESYT3A0FGR9 886 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 ANKRD63C9JTQ0 380 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 NFKBIEO00221 500 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 TTI1O43156 1089 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 DAPK3O43293 454 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 SGPL1O95470 568 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 ECHS1P30084 290 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 PEX5P50542 639 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 RNASE9P60153 205 aaKnown RBP10.96□□□□□ -0.65
TPM3-209ENST00000368527 FMO1Q01740 532 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 SLC20A2Q08357 652 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 NEDD9Q14511 834 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 CEP85LQ5SZL2 805 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 NBPF12Q5TAG4 269 aaPredicted RBP10.96□□□□□ -0.65
TPM3-209ENST00000368527 SWSAP1Q6NVH7 229 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 C15orf39Q6ZRI6 1047 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 SV2AQ7L0J3 742 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 JAMLQ86YT9 394 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 BBOF1Q8ND07 529 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 PLEKHO2Q8TD55 490 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 SLC20A1Q8WUM9 679 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 PSPC1Q8WXF1 523 aaKnown RBP10.96□□□□□ -0.65
TPM3-209ENST00000368527 SLC7A3Q8WY07 619 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 PIK3R5Q8WYR1 880 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 ARL8AQ96BM9 186 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 TMEM109Q9BVC6 243 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 NUP85Q9BW27 656 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 POLR3FQ9H1D9 316 aaPredicted RBP10.96□□□□□ -0.65
TPM3-209ENST00000368527 EPN3Q9H201 632 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 PORCNQ9H237 461 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 IKZF4Q9H2S9 585 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 GPRC5CQ9NQ84 441 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 ZNF302Q9NR11 478 aa10.96□□□□□ -0.65
TPM3-209ENST00000368527 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.96□□□□□ -0.65
TPM3-209ENST00000368527 SEPT9Q9UHD8 586 aaPredicted RBP10.96□□□□□ -0.65
TPM3-209ENST00000368527 COG5Q9UP83 839 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms