RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 PRPF6O94906 941 aaKnown RBP16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 MCF2P10911 925 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 LAG3P18627 525 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 SCP2P22307 547 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 IGFBP4P22692 258 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 GRM5P41594 1212 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 MCL1Q07820 350 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 NOLC1Q14978 699 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 L1TD1Q5T7N2 865 aaKnown RBP16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 KLHL23Q8NBE8 558 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 TMEM87AQ8NBN3 555 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 HVCN1Q96D96 273 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 NT5C1B-RDH14C9J2C7 533 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 PTGESO14684 152 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 CLDN3O15551 220 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 MEFVO15553 781 aaPredicted RBP16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 GTPBP6O43824 516 aaPredicted RBP16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 ITGB1P05556 798 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 RB1P06400 928 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 MATR3P43243 847 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 RNASELQ05823 741 aaKnown RBP16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 FAM26FQ5R3K3 315 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 KCNT2Q6UVM3 1135 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 C11orf84Q9BUA3 381 aaPredicted RBP16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 PLVAPQ9BX97 442 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 MTCH2Q9Y6C9 303 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 COL6A3P12111 3177 aa16.5■□□□□ 0.23
SMPDL3A-201ENST00000368440 PVALEFA0A1B0GWK0 134 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 GOLGA6L22H0YM25 854 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 CSPG5O95196 566 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 DNAJB1P25685 340 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 BCAR1P56945 870 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 FAM160A1Q05DH4 1040 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 CSPP1Q1MSJ5 1256 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 ZBTB41Q5SVQ8 909 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 APBB1IPQ7Z5R6 666 aaPredicted RBP16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 TMEM173Q86WV6 379 aaPredicted RBP16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 RSPH1Q8WYR4 309 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 P2RX5Q93086 422 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 ZNF558Q96NG5 402 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 STXBP5LQ9Y2K9 1186 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 PCDHB13Q9Y5F0 798 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 PCDHB12Q9Y5F1 795 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 ZMYM2Q9UBW7 1377 aa16.49■□□□□ 0.23
SMPDL3A-201ENST00000368440 ANK1P16157 1881 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 FAM189A1O60320 539 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 NR1I2O75469 434 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 ABCD1P33897 745 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 SLC11A1P49279 550 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 DPYDQ12882 1025 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 KMT5BQ4FZB7 885 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 EPM2AIP1Q7L775 607 aaPredicted RBP16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 BCL7CQ8WUZ0 217 aaPredicted RBP16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 ACCSQ96QU6 501 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 RPS6KC1Q96S38 1066 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 CCDC94Q9BW85 323 aaPredicted RBP16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 SLC39A2Q9NP94 309 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 AAASQ9NRG9 546 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 CACNG4Q9UBN1 327 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 FGF18O76093 207 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 GALTP07902 379 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 HOXD13P35453 343 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 TNFSF9P41273 254 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 CAMK1Q14012 370 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 GLRA4Q5JXX5 417 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 SLC39A11Q8N1S5 342 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 SPPL3Q8TCT6 385 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 KANSL3Q9P2N6 904 aa16.48■□□□□ 0.23
SMPDL3A-201ENST00000368440 A0A0B4J269 797 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 RPN1P04843 607 aaKnown RBP16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 POU3F3P20264 500 aaPredicted RBP16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 ADSSP30520 456 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 DSC1Q08554 894 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 GRIK3Q13003 919 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 ALCAMQ13740 583 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 NAB2Q15742 525 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 CLEC17AQ6ZS10 378 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 COLGALT2Q8IYK4 626 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 MICALL1Q8N3F8 863 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 SNX27Q96L92 541 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 MSTO1Q9BUK6 570 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 STYXL1Q9Y6J8 313 aa16.47■□□□□ 0.23
SMPDL3A-201ENST00000368440 F8W810 466 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 PRPF40AO75400 957 aaKnown RBP16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 MYL1P05976 194 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 STK4Q13043 487 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 PNOCQ13519 176 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 KIAA0895Q8NCT3 520 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 ZSWIM2Q8NEG5 633 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 SCFD1Q8WVM8 642 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 POF1BQ8WVV4 589 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 RABGGTAQ92696 567 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 ACAP3Q96P50 834 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 FAM193BQ96PV7 902 aaPredicted RBP16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 EXOC1Q9NV70 894 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 SPG21Q9NZD8 308 aa16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 PRRC2BQ5JSZ5 2229 aaKnown RBP16.46■□□□□ 0.23
SMPDL3A-201ENST00000368440 OGTO15294 1046 aa16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 EIF3DO15371 548 aaKnown RBP eCLIP16.46■□□□□ 0.22
SMPDL3A-201ENST00000368440 CXCL8P10145 99 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms