RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 OLFML3Q9NRN5 406 aa24.58■■□□□ 1.53
ECHDC1-203ENST00000368291 TBC1D7Q9P0N9 293 aa24.58■■□□□ 1.53
ECHDC1-203ENST00000368291 ACTN4O43707 911 aaKnown RBP24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 MCL1Q07820 350 aa24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 GRIK3Q13003 919 aa24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 NAB2Q15742 525 aa24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 APBB1IPQ7Z5R6 666 aaPredicted RBP24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 SLC17A8Q8NDX2 589 aa24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 IGSF21Q96ID5 467 aa24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 FAM193BQ96PV7 902 aaPredicted RBP24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 C7orf25Q9BPX7 421 aa24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 TCHPQ9BT92 498 aa24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 TLR9Q9NR96 1032 aa24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 ANKFY1Q9P2R3 1169 aa24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 SERTAD1Q9UHV2 236 aa24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 ANK1P16157 1881 aa24.57■■□□□ 1.52
ECHDC1-203ENST00000368291 NRP1O14786 923 aa24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 FSCN2O14926 492 aa24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 MEFVO15553 781 aaPredicted RBP24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 CASP1P29466 404 aa24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 CASP5P51878 434 aa24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 OSTNP61366 133 aa24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 AMPD3Q01432 767 aa24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 COASYQ13057 564 aa24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 NOLC1Q14978 699 aaKnown RBP eCLIP24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 HERC4Q5GLZ8 1057 aaPredicted RBP24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 RPS6KC1Q96S38 1066 aa24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 LRRC27Q9C0I9 530 aa24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 IKZF4Q9H2S9 585 aa24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 MRPL44Q9H9J2 332 aaKnown RBP24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 SPTBN5Q9NRC6 3674 aaKnown RBP24.56■■□□□ 1.52
ECHDC1-203ENST00000368291 A0A1W2PQ27 194 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 A0A1W2PQ64 194 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 A0A1W2PQD8 194 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 CARNS1A5YM72 827 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 ALDH2P05091 517 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 HARSP12081 509 aaKnown RBP24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 LIG4P49917 911 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 KRT17Q04695 432 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 KCNA1Q09470 495 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 ALKAL1Q6UXT8 129 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 ADGRD2Q7Z7M1 963 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 BICD1Q96G01 975 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 TMEM169Q96HH4 297 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 PYM1Q9BRP8 204 aaKnown RBP24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 VN1R3Q9BXE9 311 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 GOLPH3LQ9H4A5 285 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 MARCH5Q9NX47 278 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 CIZ1Q9ULV3 898 aaPredicted RBP24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 FAN1Q9Y2M0 1017 aa24.55■■□□□ 1.52
ECHDC1-203ENST00000368291 ANKRD63C9JTQ0 380 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 HNRNPDLO14979 420 aaKnown RBP24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 CLDN3O15551 220 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 SLFN14P0C7P3 912 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 ABCD1P33897 745 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 AFMP43652 599 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 NDUFA8P51970 172 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 SKIV2LQ15477 1246 aaKnown RBP24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 SEZ6Q53EL9 994 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 XKR4Q5GH76 650 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 CCDC65Q8IXS2 484 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 GRAMD1CQ8IYS0 662 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 HVCN1Q96D96 273 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 CCDC94Q9BW85 323 aaPredicted RBP24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 CACNG4Q9UBN1 327 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 PUF60Q9UHX1 559 aaKnown RBP24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 TISP43B9A030 160 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 F8W810 466 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 FAM189A1O60320 539 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 MYBP10242 640 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 OR1G1P47890 313 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 ASIC1P78348 528 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 HYAL1Q12794 435 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 COL19A1Q14993 1142 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 HPS3Q969F9 1004 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 ACAP3Q96P50 834 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 BLZF1Q9H2G9 400 aa24.54■■□□□ 1.52
ECHDC1-203ENST00000368291 XIRP2A4UGR9 3374 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 GCNT3O95395 438 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 EFEMP2O95967 443 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 THP07101 528 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 GTF2F1P35269 517 aaKnown RBP eCLIP24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 ANP32AP39687 249 aaKnown RBP24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 EHHADHQ08426 723 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 CUL4BQ13620 913 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 TPRNQ4KMQ1 711 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 GLRA4Q5JXX5 417 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 DDX53Q86TM3 631 aaKnown RBP24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 GLIS3Q8NEA6 775 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 SNX27Q96L92 541 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 PPP1R10Q96QC0 940 aaKnown RBP24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 TCF25Q9BQ70 676 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 PAAF1Q9BRP4 392 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 PRG3Q9Y2Y8 225 aaPredicted RBP24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 STYXL1Q9Y6J8 313 aa24.53■■□□□ 1.52
ECHDC1-203ENST00000368291 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 A0A0B4J269 797 aa24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 SYKP43405 635 aa24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 TUSC3Q13454 348 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms