RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 TRABDQ9H4I3 376 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 DIP2AQ14689 1571 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 EIF4E1BA6NMX2 242 aaKnown RBP12.17□□□□□ -0.46
RD3-201ENST00000367002 GOLGA8RI6L899 631 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 ATMINO43313 823 aaPredicted RBP12.17□□□□□ -0.46
RD3-201ENST00000367002 HSPA4LO95757 839 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 FAM102AQ5T9C2 384 aaPredicted RBP12.17□□□□□ -0.46
RD3-201ENST00000367002 PACSIN1Q9BY11 444 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 TMEM117Q9H0C3 514 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 VPS11Q9H270 941 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 MID2Q9UJV3 735 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 A0A087X0B3 334 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 CDH6P55285 790 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 TBX2Q13207 712 aaPredicted RBP12.17□□□□□ -0.46
RD3-201ENST00000367002 STRIP1Q5VSL9 837 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 INTS5Q6P9B9 1019 aaKnown RBP12.17□□□□□ -0.46
RD3-201ENST00000367002 HHIPL2Q6UWX4 724 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 LRRC31Q6UY01 552 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 RHPN2Q8IUC4 686 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 MDM1Q8TC05 714 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 NUDCD1Q96RS6 583 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 SENP1Q9P0U3 644 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 FBXO40Q9UH90 709 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 USP15Q9Y4E8 981 aaPredicted RBP12.17□□□□□ -0.46
RD3-201ENST00000367002 SPDYE16A6NNV3 312 aaPredicted RBP12.17□□□□□ -0.46
RD3-201ENST00000367002 RSPH10B2B2RC85 870 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 LPXNO60711 386 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 DGAT1O75907 488 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 TTC4O95801 387 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 PDHA1P08559 390 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 RSPH10BP0C881 870 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 GPC3P51654 580 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 EPHB1P54762 984 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 CDK17Q00537 523 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 MKRN3Q13064 507 aaKnown RBP12.17□□□□□ -0.46
RD3-201ENST00000367002 PDE1CQ14123 709 aaPredicted RBP12.17□□□□□ -0.46
RD3-201ENST00000367002 PTGISQ16647 500 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 SPDYE2Q495Y8 402 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 EPC2Q52LR7 807 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 ANKMY2Q8IV38 441 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 CASKIN2Q8WXE0 1202 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 SPDL1Q96EA4 605 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 IL17RAQ96F46 866 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 EFHD1Q9BUP0 239 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 OSBPL8Q9BZF1 889 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 CYP26B1Q9NR63 512 aa12.17□□□□□ -0.46
RD3-201ENST00000367002 KLHL8Q9P2G9 620 aaPredicted RBP12.17□□□□□ -0.46
RD3-201ENST00000367002 M0QYV0 167 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 LMNAP02545 664 aaKnown RBP12.16□□□□□ -0.46
RD3-201ENST00000367002 OATP04181 439 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 CASP4P49662 377 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 MDM2Q00987 491 aaPredicted RBP12.16□□□□□ -0.46
RD3-201ENST00000367002 WDR72Q3MJ13 1102 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 FAM118BQ9BPY3 351 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 MRPL4Q9BYD3 311 aaKnown RBP12.16□□□□□ -0.46
RD3-201ENST00000367002 SMYD3Q9H7B4 428 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 KCND2Q9NZV8 630 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 PFDN6O15212 129 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 KRT3P12035 628 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 NPEPPSP55786 919 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 BAATQ14032 418 aaPredicted RBP12.16□□□□□ -0.46
RD3-201ENST00000367002 NUDCD3Q8IVD9 361 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 C4orf33Q8N1A6 199 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 PIP4K2CQ8TBX8 421 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 TTC1Q99614 292 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 NCAPGQ9BPX3 1015 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 FAF1Q9UNN5 650 aaPredicted RBP12.16□□□□□ -0.46
RD3-201ENST00000367002 TMEM120BA0PK00 339 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 FOXN3O00409 490 aaPredicted RBP12.16□□□□□ -0.46
RD3-201ENST00000367002 MED24O75448 989 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 PON1P27169 355 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 NFX1Q12986 1120 aaKnown RBP12.16□□□□□ -0.46
RD3-201ENST00000367002 P3H1Q32P28 736 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 MYLK4Q86YV6 388 aaPredicted RBP12.16□□□□□ -0.46
RD3-201ENST00000367002 PDZD8Q8NEN9 1154 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 SERPINI1Q99574 410 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 THAP2Q9H0W7 228 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 AGPAT3Q9NRZ7 376 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 FNDC3AQ9Y2H6 1198 aaKnown RBP12.16□□□□□ -0.46
RD3-201ENST00000367002 PCDHB2Q9Y5E7 798 aa12.16□□□□□ -0.46
RD3-201ENST00000367002 SLC26A4O43511 780 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 SASH3O75995 380 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 RAD23BP54727 409 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 NOP14P78316 857 aaKnown RBP12.15□□□□□ -0.46
RD3-201ENST00000367002 MTM1Q13496 603 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 C1orf146Q5VVC0 180 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 MTMR8Q96EF0 704 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 FAM161BQ96MY7 647 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 LCMT1Q9UIC8 334 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 ADGRB2O60241 1585 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 EIF3DO15371 548 aaKnown RBP eCLIP12.15□□□□□ -0.46
RD3-201ENST00000367002 ZWINTO95229 277 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 OSBPP22059 807 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 SMAD1Q15797 465 aaKnown RBP12.15□□□□□ -0.46
RD3-201ENST00000367002 BARGINQ6ZT62 677 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 FAM193BQ96PV7 902 aaPredicted RBP12.15□□□□□ -0.46
RD3-201ENST00000367002 JPH1Q9HDC5 661 aaPredicted RBP12.15□□□□□ -0.46
RD3-201ENST00000367002 DDX56Q9NY93 547 aaKnown RBP12.15□□□□□ -0.46
RD3-201ENST00000367002 RAB21Q9UL25 225 aa12.15□□□□□ -0.46
RD3-201ENST00000367002 CLTCQ00610 1675 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms