RNA–Protein interactions for RNA: ENST00000366888.6

PACRG-202, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-202ENST00000366888 ZDHHC7Q9NXF8 308 aa8.89□□□□□ -0.99
PACRG-202ENST00000366888 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.89□□□□□ -0.99
PACRG-202ENST00000366888 PARP2Q9UGN5 583 aa8.89□□□□□ -0.99
PACRG-202ENST00000366888 DPP7Q9UHL4 492 aa8.89□□□□□ -0.99
PACRG-202ENST00000366888 ADAM28Q9UKQ2 775 aa8.89□□□□□ -0.99
PACRG-202ENST00000366888 POLIQ9UNA4 740 aa8.89□□□□□ -0.99
PACRG-202ENST00000366888 MTF2Q9Y483 593 aaPredicted RBP8.89□□□□□ -0.99
PACRG-202ENST00000366888 RALGAPA1Q6GYQ0 2036 aa8.89□□□□□ -0.99
PACRG-202ENST00000366888 CCL16O15467 120 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 ASAP2O43150 1006 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 ADAM12O43184 909 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 TADA2AO75478 443 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 CD72P21854 359 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 GLRA2P23416 452 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 PSMA5P28066 241 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 AXLP30530 894 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 UBXN2BQ14CS0 331 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 ZC3H14Q6PJT7 736 aaKnown RBP8.88□□□□□ -0.99
PACRG-202ENST00000366888 PIK3AP1Q6ZUJ8 805 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 RUFY3Q7L099 469 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 MAEAQ7L5Y9 396 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 OTUD6AQ7L8S5 288 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 CEP57Q86XR8 500 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 ITFG1Q8TB96 612 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 RUBCNQ92622 972 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 CCDC51Q96ER9 411 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 KXD1Q9BQD3 176 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 PHF20Q9BVI0 1012 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 CXCL16Q9H2A7 254 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 ZSWIM4Q9H7M6 989 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 SLC2A4RGQ9NR83 387 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.88□□□□□ -0.99
PACRG-202ENST00000366888 PLSCR2Q9NRY7 297 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 SPATA6Q9NWH7 488 aaPredicted RBP8.88□□□□□ -0.99
PACRG-202ENST00000366888 HCFC1R1Q9NWW0 138 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 FNIP2Q9P278 1114 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 FBXW11Q9UKB1 542 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 GIT1Q9Y2X7 761 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 CITO14578 2027 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 NCOR2Q9Y618 2525 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 COL4A2P08572 1712 aa8.88□□□□□ -0.99
PACRG-202ENST00000366888 SLITRK3O94933 977 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 KIF4AO95239 1232 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 PAPLNO95428 1278 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 C8AP07357 584 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 GCFC2P16383 781 aaKnown RBP8.87□□□□□ -0.99
PACRG-202ENST00000366888 IGFBP6P24592 240 aaPredicted RBP8.87□□□□□ -0.99
PACRG-202ENST00000366888 STARD6P59095 220 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 NCBP1Q09161 790 aaKnown RBP8.87□□□□□ -0.99
PACRG-202ENST00000366888 GRIK3Q13003 919 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 TFDP1Q14186 410 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 HSP90AA2PQ14568 343 aaPredicted RBP8.87□□□□□ -0.99
PACRG-202ENST00000366888 MXD4Q14582 209 aaPredicted RBP8.87□□□□□ -0.99
PACRG-202ENST00000366888 LIN9Q5TKA1 542 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 FAM171A1Q5VUB5 890 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 PPP4R3AQ6IN85 833 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 GALNT17Q6IS24 598 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 CENPQQ7L2Z9 268 aaPredicted RBP8.87□□□□□ -0.99
PACRG-202ENST00000366888 EXOC8Q8IYI6 725 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 HACE1Q8IYU2 909 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 SUMF1Q8NBK3 374 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 ING5Q8WYH8 240 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 FGF13Q92913 245 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 EIF2AK1Q9BQI3 630 aaKnown RBP8.87□□□□□ -0.99
PACRG-202ENST00000366888 CLSTN3Q9BQT9 956 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 POLR3FQ9H1D9 316 aaPredicted RBP8.87□□□□□ -0.99
PACRG-202ENST00000366888 ZSWIM6Q9HCJ5 1215 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 GPRC5CQ9NQ84 441 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 CDH7Q9ULB5 785 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 USP20Q9Y2K6 914 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 PPME1Q9Y570 386 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 KIF26AQ9ULI4 1882 aaPredicted RBP8.87□□□□□ -0.99
PACRG-202ENST00000366888 GPR179Q6PRD1 2367 aa8.87□□□□□ -0.99
PACRG-202ENST00000366888 SF3B1O75533 1304 aaKnown RBP eCLIP8.87□□□□□ -0.99
PACRG-202ENST00000366888 KANSL1LA0AUZ9 987 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 LRRIQ4A6NIV6 560 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 TTLL13PA6NNM8 815 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 PTGESO14684 152 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 LAMTOR5O43504 91 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 USO1O60763 962 aaKnown RBP8.86□□□□□ -0.99
PACRG-202ENST00000366888 KINO60870 393 aaKnown RBP8.86□□□□□ -0.99
PACRG-202ENST00000366888 ARL2P36404 184 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 SCRN1Q12765 414 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 NR5A1Q13285 461 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 PUM1Q14671 1186 aaKnown RBP eCLIP8.86□□□□□ -0.99
PACRG-202ENST00000366888 MLF2Q15773 248 aaPredicted RBP8.86□□□□□ -0.99
PACRG-202ENST00000366888 PSMD5Q16401 504 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 RSPO4Q2I0M5 234 aaPredicted RBP8.86□□□□□ -0.99
PACRG-202ENST00000366888 PPM1LQ5SGD2 360 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 SLC27A1Q6PCB7 646 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 CPLX2Q6PUV4 134 aaKnown RBP8.86□□□□□ -0.99
PACRG-202ENST00000366888 TSSK4Q6SA08 328 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 IFNLR1Q8IU57 520 aaPredicted RBP8.86□□□□□ -0.99
PACRG-202ENST00000366888 LNX1Q8TBB1 728 aaPredicted RBP8.86□□□□□ -0.99
PACRG-202ENST00000366888 SLC7A14Q8TBB6 771 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 PIGOQ8TEQ8 1089 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 ZNF274Q96GC6 653 aaPredicted RBP8.86□□□□□ -0.99
PACRG-202ENST00000366888 CCDC43Q96MW1 224 aaKnown RBP8.86□□□□□ -0.99
PACRG-202ENST00000366888 TTPALQ9BTX7 342 aa8.86□□□□□ -0.99
PACRG-202ENST00000366888 DLL3Q9NYJ7 618 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms