RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 SPATA31D4Q6ZUB0 917 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 PJA1Q8NG27 643 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 KCNG4Q8TDN1 519 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 RIN2Q8WYP3 895 aaPredicted RBP12.96□□□□□ -0.33
MRPL55-213ENST00000366740 TMX3Q96JJ7 454 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 MTRQ99707 1265 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 GPR62Q9BZJ7 368 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 PRKD2Q9BZL6 878 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 CSRNP2Q9H175 543 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 PIDD1Q9HB75 910 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 XPNPEP1Q9NQW7 623 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
MRPL55-213ENST00000366740 GIT1Q9Y2X7 761 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 SIT1Q9Y3P8 196 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 HES2Q9Y543 173 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 ZFP37Q9Y6Q3 630 aaPredicted RBP12.96□□□□□ -0.33
MRPL55-213ENST00000366740 NUMBLQ9Y6R0 609 aa12.96□□□□□ -0.33
MRPL55-213ENST00000366740 KMT2BQ9UMN6 2715 aaPredicted RBP12.96□□□□□ -0.34
MRPL55-213ENST00000366740 GREB1Q4ZG55 1949 aa12.96□□□□□ -0.34
MRPL55-213ENST00000366740 MED19A0JLT2 244 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-213ENST00000366740 NR1I2O75469 434 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 ZMYND10O75800 440 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 DCNP07585 359 aaKnown RBP12.95□□□□□ -0.34
MRPL55-213ENST00000366740 MYBP10242 640 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 GLULP15104 373 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 GCFC2P16383 781 aaKnown RBP12.95□□□□□ -0.34
MRPL55-213ENST00000366740 STARD6P59095 220 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 CREMQ03060 361 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 TRIM29Q14134 588 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 MXD4Q14582 209 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-213ENST00000366740 AMHR2Q16671 573 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 USP41Q3LFD5 358 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 DCLRE1AQ6PJP8 1040 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 GET4Q7L5D6 327 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-213ENST00000366740 OTUD6AQ7L8S5 288 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 PALB2Q86YC2 1186 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 C1orf210Q8IVY1 113 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 KIAA2013Q8IYS2 634 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 FBXO18Q8NFZ0 1043 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 CPB2Q96IY4 423 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 C8orf76Q96K31 380 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 B3GALT6Q96L58 329 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 COLEC11Q9BWP8 271 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 NFKBIZQ9BYH8 718 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 BRMS1Q9HCU9 246 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 ADAM28Q9UKQ2 775 aa12.95□□□□□ -0.34
MRPL55-213ENST00000366740 POTEMA6NI47 508 aa12.94□□□□□ -0.34
MRPL55-213ENST00000366740 ARF4P18085 180 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-213ENST00000366740 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
MRPL55-213ENST00000366740 MBTD1Q05BQ5 628 aa12.94□□□□□ -0.34
MRPL55-213ENST00000366740 GRIK3Q13003 919 aa12.94□□□□□ -0.34
MRPL55-213ENST00000366740 XKR9Q5GH70 373 aa12.94□□□□□ -0.34
MRPL55-213ENST00000366740 SPECC1Q5M775 1068 aa12.94□□□□□ -0.34
MRPL55-213ENST00000366740 MAML2Q8IZL2 1156 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-213ENST00000366740 SUMF1Q8NBK3 374 aa12.94□□□□□ -0.34
MRPL55-213ENST00000366740 DDX23Q9BUQ8 820 aaKnown RBP12.94□□□□□ -0.34
MRPL55-213ENST00000366740 NXF3Q9H4D5 531 aaKnown RBP12.94□□□□□ -0.34
MRPL55-213ENST00000366740 DLL3Q9NYJ7 618 aa12.94□□□□□ -0.34
MRPL55-213ENST00000366740 RGL1Q9NZL6 768 aa12.94□□□□□ -0.34
MRPL55-213ENST00000366740 FBXW11Q9UKB1 542 aa12.94□□□□□ -0.34
MRPL55-213ENST00000366740 SPAG17Q6Q759 2223 aa12.94□□□□□ -0.34
MRPL55-213ENST00000366740 EML5Q05BV3 1969 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 ZNF638Q14966 1978 aaKnown RBP12.93□□□□□ -0.34
MRPL55-213ENST00000366740 ZBTB39O15060 712 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 CAPSQ13938 189 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 TFDP1Q14186 410 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 PUM1Q14671 1186 aaKnown RBP eCLIP12.93□□□□□ -0.34
MRPL55-213ENST00000366740 ZNF528Q3MIS6 628 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 DGLUCYQ7Z3D6 616 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 GLYCTKQ8IVS8 523 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 HACE1Q8IYU2 909 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 FAM184AQ8NB25 1140 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 RUBCNQ92622 972 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 FGF14Q92915 247 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 BORCS6Q96GS4 357 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 DYDC2Q96IM9 177 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 NAP1L4Q99733 375 aaKnown RBP12.93□□□□□ -0.34
MRPL55-213ENST00000366740 FOXQ1Q9C009 403 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 TMEM60Q9H2L4 133 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 ZSWIM4Q9H7M6 989 aa12.93□□□□□ -0.34
MRPL55-213ENST00000366740 INO80B-WBP1J3KQ70 363 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 LYPLA2O95372 231 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 HNRNPA1P09651 372 aaKnown RBP eCLIP12.92□□□□□ -0.34
MRPL55-213ENST00000366740 RPL17P18621 184 aaKnown RBP12.92□□□□□ -0.34
MRPL55-213ENST00000366740 ATP2B1P20020 1258 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 FSHRP23945 695 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 HOXA9P31269 272 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 ARL2P36404 184 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 CACNA1BQ00975 2339 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 NCBP1Q09161 790 aaKnown RBP12.92□□□□□ -0.34
MRPL55-213ENST00000366740 CTTNQ14247 550 aaKnown RBP12.92□□□□□ -0.34
MRPL55-213ENST00000366740 RTP2Q5QGT7 225 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 NCAPH2Q6IBW4 605 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 SLC27A1Q6PCB7 646 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 PARM1Q6UWI2 310 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 ASAP3Q8TDY4 903 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 SHDQ96IW2 340 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 MTMR9Q96QG7 549 aa12.92□□□□□ -0.34
MRPL55-213ENST00000366740 RPP25Q9BUL9 199 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms