RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 IFT122Q9HBG6 1241 aa9.56□□□□□ -0.88
HMGB1P39-201ENST00000366304 AGPAT5Q9NUQ2 364 aa9.56□□□□□ -0.88
HMGB1P39-201ENST00000366304 NDRG2Q9UN36 371 aaKnown RBP9.56□□□□□ -0.88
HMGB1P39-201ENST00000366304 WASF3Q9UPY6 502 aa9.56□□□□□ -0.88
HMGB1P39-201ENST00000366304 ZFP37Q9Y6Q3 630 aaPredicted RBP9.56□□□□□ -0.88
HMGB1P39-201ENST00000366304 DMXL2Q8TDJ6 3036 aa9.56□□□□□ -0.88
HMGB1P39-201ENST00000366304 IGSF10Q6WRI0 2623 aa9.56□□□□□ -0.88
HMGB1P39-201ENST00000366304 CNTNAP5Q8WYK1 1306 aa9.56□□□□□ -0.88
HMGB1P39-201ENST00000366304 ASH1LQ9NR48 2969 aaKnown RBP9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 NOTCH4Q99466 2003 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 CARNS1A5YM72 827 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 CHURC1-FNTBB4DL54 471 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 TULP1O00294 542 aaPredicted RBP9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 CCL16O15467 120 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 PRC1O43663 620 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 LRP3O75074 770 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 CYP3A4P08684 503 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 SFPQP23246 707 aaKnown RBP eCLIP9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 ZNF76P36508 570 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 OR1G1P47890 313 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 FNTBP49356 437 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 GNAQP50148 359 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 ADCY7P51828 1080 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 NAPAP54920 295 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 ADCY1Q08828 1119 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 SART3Q15020 963 aaKnown RBP9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 SLC5A9Q2M3M2 681 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 UNQ6494/PRO21346Q6UXR6 183 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 CATSPER4Q7RTX7 472 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 RALYLQ86SE5 291 aaKnown RBP9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 RHPN2Q8IUC4 686 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 SMAP1Q8IYB5 467 aaPredicted RBP9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 KDF1Q8NAX2 398 aaPredicted RBP9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 URGCPQ8TCY9 931 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 RSPH1Q8WYR4 309 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 FAM167AQ96KS9 214 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 ZFP42Q96MM3 310 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 GAD1Q99259 594 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 PHF20Q9BVI0 1012 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 EIF2AQ9BY44 585 aaKnown RBP9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 FAM126AQ9BYI3 521 aaPredicted RBP9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 FNIP2Q9P278 1114 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 STK39Q9UEW8 545 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 FBXW11Q9UKB1 542 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 HES2Q9Y543 173 aa9.55□□□□□ -0.88
HMGB1P39-201ENST00000366304 COL4A2P08572 1712 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 SMG1Q96Q15 3661 aaKnown RBP9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 SMCO2A6NFE2 343 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 ARL5CA6NH57 179 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 K7ESF4 209 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 GIPC1O14908 333 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 ZIC2O95409 532 aaPredicted RBP9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 FOSP01100 380 aaPredicted RBP9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 SKIP12755 728 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 FCARP24071 287 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 IGFBP6P24592 240 aaPredicted RBP9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 RAB27AP51159 221 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 SCNN1GP51170 649 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 PFKPQ01813 784 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 SIM2Q14190 667 aaPredicted RBP9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 MTERF2Q49AM1 385 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 TANGO2Q6ICL3 276 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 ZNF852Q6ZMS4 543 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 MTSS1LQ765P7 747 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 FANCBQ8NB91 859 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 GSTCDQ8NEC7 633 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 PGBD4Q96DM1 585 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 NLRP4Q96MN2 994 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 FAM193BQ96PV7 902 aaPredicted RBP9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 NELL2Q99435 816 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 CLSTN3Q9BQT9 956 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 PAAF1Q9BRP4 392 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 LRRC2Q9BYS8 371 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 UNC45AQ9H3U1 944 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 SMOC1Q9H4F8 434 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 NRBP2Q9NSY0 501 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 TBC1D22BQ9NU19 505 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 SUCLA2Q9P2R7 463 aaPredicted RBP9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 DNMT3BQ9UBC3 853 aaKnown RBP9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 RAB23Q9ULC3 237 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 LAMA1P25391 3075 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 NCANO14594 1321 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 F5P12259 2224 aa9.54□□□□□ -0.88
HMGB1P39-201ENST00000366304 SRRM3A6NNA2 597 aaPredicted RBP9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 HIP1O00291 1037 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 CHMP2AO43633 222 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 KCNK5O95279 499 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 C1RP00736 705 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 GSPT1P15170 499 aaKnown RBP9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 MLH1P40692 756 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 LIMK1P53667 647 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 RING1Q06587 406 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 AP3B2Q13367 1082 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 PRR16Q569H4 304 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 FUT10Q6P4F1 479 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 LRSAM1Q6UWE0 723 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 NFXL1Q6ZNB6 911 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 NYAP1Q6ZVC0 841 aa9.53□□□□□ -0.88
HMGB1P39-201ENST00000366304 ZNF410Q86VK4 478 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms