RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 DDX12PQ92771 950 aa12.37□□□□□ -0.43
CSNK1E-202ENST00000366216 CASP10Q92851 521 aa12.37□□□□□ -0.43
CSNK1E-202ENST00000366216 DNAJC19Q96DA6 116 aa12.37□□□□□ -0.43
CSNK1E-202ENST00000366216 MED15Q96RN5 788 aa12.37□□□□□ -0.43
CSNK1E-202ENST00000366216 UNC45AQ9H3U1 944 aa12.37□□□□□ -0.43
CSNK1E-202ENST00000366216 FANCLQ9NW38 375 aa12.37□□□□□ -0.43
CSNK1E-202ENST00000366216 NFE2L3Q9Y4A8 694 aa12.37□□□□□ -0.43
CSNK1E-202ENST00000366216 PCDHB7Q9Y5E2 793 aa12.37□□□□□ -0.43
CSNK1E-202ENST00000366216 R4GN57 208 aa12.37□□□□□ -0.43
CSNK1E-202ENST00000366216 IGSF9BQ9UPX0 1349 aa12.37□□□□□ -0.43
CSNK1E-202ENST00000366216 TBKBP1A7MCY6 615 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 GOLGA6L6A8MZA4 724 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 E9PMD0 336 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 M0QZ92 97 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 SLITRK3O94933 977 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 TPM3P06753 285 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 PRCPP42785 496 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 FANCCQ00597 558 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 EHHADHQ08426 723 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 PAK1Q13153 545 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 DHX8Q14562 1220 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 RSPO4Q2I0M5 234 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 POTEGQ6S5H5 508 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 SMYD4Q8IYR2 804 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 TRAPPC12Q8WVT3 735 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 DHTKD1Q96HY7 919 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 CDHR1Q96JP9 859 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 FAM49AQ9H0Q0 323 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 CWH43Q9H720 699 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 CDHR5Q9HBB8 845 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 NGRNQ9NPE2 291 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 PUF60Q9UHX1 559 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 GDAQ9Y2T3 454 aa12.36□□□□□ -0.43
CSNK1E-202ENST00000366216 STK25O00506 426 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 PSMA7O14818 248 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 CBFA2T2O43439 604 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 PTMAP06454 111 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 WEE2P0C1S8 567 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 KCNA2P16389 499 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 LAG3P18627 525 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 CYP11B2P19099 503 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 TCF7P36402 384 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 PLCB3Q01970 1234 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 ITGB3BPQ13352 177 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 KLHL10Q6JEL2 608 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 LRRC55Q6ZSA7 311 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 GPBP1Q86WP2 473 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 CCDC65Q8IXS2 484 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 SIX5Q8N196 739 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 RDM1Q8NG50 284 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 NELFBQ8WX92 580 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 RUBCNQ92622 972 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 DYDC2Q96IM9 177 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 NACC1Q96RE7 527 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 SENP7Q9BQF6 1050 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 ERVK-5Q9HDB9 667 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 RNF19AQ9NV58 838 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 TYW1Q9NV66 732 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 ERAP1Q9NZ08 941 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 RGL1Q9NZL6 768 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 DBR1Q9UK59 544 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 CTNND2Q9UQB3 1225 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 USTQ9Y2C2 406 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 TRPV2Q9Y5S1 764 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 HCFC2Q9Y5Z7 792 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 NFASCO94856 1347 aa12.35□□□□□ -0.43
CSNK1E-202ENST00000366216 FRMD3A2A2Y4 597 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 CHMP2AO43633 222 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 LYPLA2O95372 231 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 P4HBP07237 508 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 SFNP31947 248 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 JAK3P52333 1124 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 IGBP1P78318 339 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 KRT76Q01546 638 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 CYP4A11Q02928 519 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 STK4Q13043 487 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 ST3GAL2Q16842 350 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 CDKAL1Q5VV42 579 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 KIAA1841Q6NSI8 718 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 FOXR2Q6PJQ5 311 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 ZC3H14Q6PJT7 736 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 DYMQ7RTS9 669 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 MIER3Q7Z3K6 550 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 TMEM40Q8WWA1 233 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 CYP26B1Q9NR63 512 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 PANK4Q9NVE7 773 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 FBXL21Q9UKT6 434 aa12.34□□□□□ -0.43
CSNK1E-202ENST00000366216 CNOT1A5YKK6 2376 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 BICDL2A1A5D9 508 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 EOMESO95936 686 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 SSBP05455 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 ATP1A3P13637 1013 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 INSRRP14616 1297 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 CCNE1P24864 410 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 PBX3P40426 434 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 STX17P56962 302 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 UBASH3AP57075 661 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 SPAG1Q07617 926 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 TDGQ13569 410 aa12.33□□□□□ -0.44
CSNK1E-202ENST00000366216 CTTNQ14247 550 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms