RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 CYP1A2P05177 515 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 CYP11B1P15538 503 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 CHN1P15882 459 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 NCKAP1LP55160 1127 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 FAM102BQ5T8I3 360 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 CCDC105Q8IYK2 499 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 ZNF653Q96CK0 615 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 TAAR1Q96RJ0 339 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 ST6GALNAC4Q9H4F1 302 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 CNOT10Q9H9A5 744 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 MAPK13O15264 365 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 PMM2O15305 246 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 CTNND1O60716 968 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 LYPLA2O95372 231 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 SLCO1A2P46721 670 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 CYP1B1Q16678 543 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 PCNX4Q63HM2 1172 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 CCDC121Q6ZUS5 278 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 NIPA1Q7RTP0 329 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 CPLX4Q7Z7G2 160 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 SYTL5Q8TDW5 730 aaPredicted RBP16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 TAS1R2Q8TE23 839 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 EPS8L3Q8TE67 593 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 PARD3BQ8TEW8 1205 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 ZNF341Q9BYN7 854 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 RAVER2Q9HCJ3 691 aaKnown RBP16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 LOXHD1Q8IVV2 1947 aa16.68■□□□□ 0.26
CNKSR1-201ENST00000361530 CCDC169A6NNP5 214 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 GRIN3BO60391 1043 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 CCNE2O96020 404 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 MMP13P45452 471 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 MFAP3P55082 362 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 SOX10P56693 466 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 CACNA2D3Q8IZS8 1091 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 SELENOSQ9BQE4 189 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 FAM129AQ9BZQ8 928 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 KLC4Q9NSK0 619 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 GGPS1O95749 300 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 CNGA1P29973 690 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 SF3A3Q12874 501 aaKnown RBP eCLIP16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 XKR9Q5GH70 373 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 KRT39Q6A163 491 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 TMEM161BQ8NDZ6 487 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 DDX1Q92499 740 aaKnown RBP16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 CENPTQ96BT3 561 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 CHMP6Q96FZ7 201 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 CCDC114Q96M63 670 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 ZNF317Q96PQ6 595 aaPredicted RBP16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 TBX20Q9UMR3 447 aa16.67■□□□□ 0.26
CNKSR1-201ENST00000361530 RGS16O15492 202 aaPredicted RBP16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 CLDN3O15551 220 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 TBC1D12O60347 775 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 MYCLP12524 364 aaPredicted RBP16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 NPTX2P47972 431 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 CDR1P51861 262 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 CDR2Q01850 454 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 C4orf19Q8IY42 314 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 OGFOD1Q8N543 542 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 MORC4Q8TE76 937 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 ATXN2LQ8WWM7 1075 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 ART4Q93070 314 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 MTFR1LQ9H019 292 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 CNOT7Q9UIV1 285 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 GTF3C4Q9UKN8 822 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 SRCAPQ6ZRS2 3230 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 GOLGA6L7A0A1B0GV03 622 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 TP73O15350 636 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 RIPK2O43353 540 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 ATP2C2O75185 946 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 GKAP1Q5VSY0 366 aaPredicted RBP16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 SLC39A4Q6P5W5 647 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 C1orf54Q8WWF1 131 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 PSPC1Q8WXF1 523 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 BSNDQ8WZ55 320 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 TRIM7Q9C029 511 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 MTRF1LQ9UGC7 380 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 COQ4Q9Y3A0 265 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 DLATP10515 647 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 HMGB2P26583 209 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 GPC3P51654 580 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 MCCD1P59942 119 aaPredicted RBP16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 RPS6P62753 249 aaKnown RBP16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 ANKRD20A8PQ5CZ79 823 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 CCDC25Q86WR0 208 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 PI4K2AQ9BTU6 479 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 TBC1D22BQ9NU19 505 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 PGAP2Q9UHJ9 254 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 MTUS1Q9ULD2 1270 aa16.66■□□□□ 0.26
CNKSR1-201ENST00000361530 RARGP13631 454 aa16.65■□□□□ 0.26
CNKSR1-201ENST00000361530 RWDD2BP57060 319 aa16.65■□□□□ 0.26
CNKSR1-201ENST00000361530 RNF207Q6ZRF8 634 aa16.65■□□□□ 0.26
CNKSR1-201ENST00000361530 ANO5Q75V66 913 aa16.65■□□□□ 0.26
CNKSR1-201ENST00000361530 PHLDB2Q86SQ0 1253 aa16.65■□□□□ 0.26
CNKSR1-201ENST00000361530 SUPT20HQ8NEM7 779 aa16.65■□□□□ 0.26
CNKSR1-201ENST00000361530 TMEM8AQ9HCN3 771 aa16.65■□□□□ 0.26
CNKSR1-201ENST00000361530 RAB20Q9NX57 234 aa16.65■□□□□ 0.26
CNKSR1-201ENST00000361530 PARP2Q9UGN5 583 aa16.65■□□□□ 0.26
CNKSR1-201ENST00000361530 DENND3A2RUS2 1198 aa16.65■□□□□ 0.26
CNKSR1-201ENST00000361530 CHUKO15111 745 aa16.65■□□□□ 0.26
CNKSR1-201ENST00000361530 RASSF9O75901 435 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms