RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 GYS2P54840 703 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 KCNH2Q12809 1159 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 ARHGEF6Q15052 776 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 MAP3K21Q5TCX8 1036 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 MTHFD1LQ6UB35 978 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 RHPN2Q8IUC4 686 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 LMBR1Q8WVP7 490 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 POMGNT1Q8WZA1 660 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 EDEM3Q9BZQ6 932 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 LACRTQ9GZZ8 138 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 SPC25Q9HBM1 224 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 HSPBP1Q9NZL4 362 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 RRN3P2A6NIE6 340 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 IVLP07476 585 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 SMIM10L2AP0DMW4 78 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 SMIM10L2BP0DMW5 78 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 GJA9P57773 515 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 PURAQ00577 322 aaKnown RBP14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 MFSD10Q14728 455 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 RNF149Q8NC42 400 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 RUBCNQ92622 972 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 CAPZA3Q96KX2 299 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 PPP1R16BQ96T49 567 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 DEF6Q9H4E7 631 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 SAGE1Q9NXZ1 904 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 FAN1Q9Y2M0 1017 aa14.25□□□□□ -0.13
SQSTM1-201ENST00000360718 SRGAP2O75044 1071 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 ADAMTS4O75173 837 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 GNRH1P01148 92 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 TNNT3P45378 269 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 AARSP49588 968 aaKnown RBP eCLIP14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 PSEN2P49810 448 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 INTS8Q75QN2 995 aaKnown RBP14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 RDH13Q8NBN7 331 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 RAET1EQ8TD07 263 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 KATNAL1Q9BW62 490 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 HAPLN2Q9GZV7 340 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 CCDC113Q9H0I3 377 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 UPF3AQ9H1J1 476 aaKnown RBP14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 MMRN2Q9H8L6 949 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 SCN10AQ9Y5Y9 1956 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 MACROD2A1Z1Q3 448 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 LRRIQ3A6PVS8 624 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 MAPK13O15264 365 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 KPNA6O60684 536 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 VTNP04004 478 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 HMGCRP04035 888 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 CAPN2P17655 700 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 GARTP22102 1010 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 ITIH3Q06033 890 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 GNASQ5JWF2 1037 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 CDCA2Q69YH5 1023 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 SLFN12LQ6IEE8 588 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 NLRP4Q96MN2 994 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 ALS2CR12Q96Q35 445 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 IFIH1Q9BYX4 1025 aaKnown RBP14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 MINDY3Q9H8M7 445 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 PCDHA13Q9Y5I0 950 aa14.24□□□□□ -0.13
SQSTM1-201ENST00000360718 GOLGA8IPA6NC78 632 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 RCCD1A6NED2 376 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 GOLGA8JA6NMD2 632 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 KIAA0391O15091 583 aaKnown RBP14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 LCA5LO95447 670 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 ZNF200P98182 395 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 CYP27A1Q02318 531 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 PDE4CQ08493 712 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 MAPK6Q16659 721 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 SAAL1Q96ER3 474 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 ZBTB45Q96K62 511 aaPredicted RBP14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 SNX12Q9UMY4 172 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 TFR2Q9UP52 801 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 AKT3Q9Y243 479 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 SIK3Q9Y2K2 1263 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 NRCAMQ92823 1304 aa14.23□□□□□ -0.13
SQSTM1-201ENST00000360718 TULP2O00295 520 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 AKR1B10O60218 316 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 N4BP1O75113 896 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 CSDE1O75534 798 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 IQCF3P0C7M6 154 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 RARBP10826 455 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 TCP1P17987 556 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 MATR3P43243 847 aaKnown RBP eCLIP14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 ADAM17P78536 824 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 SLC20A2Q08357 652 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 BFSP1Q12934 665 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 CXCL17Q6UXB2 119 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 CCNI2Q6ZMN8 369 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 USP37Q86T82 979 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 KIAA0319LQ8IZA0 1049 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 MMGT1Q8N4V1 131 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 SLC35C1Q96A29 364 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 CRACR2AQ9BSW2 395 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 TARS2Q9BW92 718 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 NUCKS1Q9H1E3 243 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 IFT122Q9HBG6 1241 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 KIAA1586Q9HCI6 787 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 ZEB2O60315 1214 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 MSCO60682 206 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 RPS6KA5O75582 802 aa14.22□□□□□ -0.13
SQSTM1-201ENST00000360718 PIGRP01833 764 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms