RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 FMNL1O95466 1100 aaPredicted RBP13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 ENO3P13929 434 aaPredicted RBP13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 PLEKHA7Q6IQ23 1121 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 TSPAN17Q96FV3 270 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 PAGE5Q96GU1 130 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 FBXO40Q9UH90 709 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 TSPAN9O75954 239 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 NCALDP61601 193 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 IFNL3Q8IZI9 196 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 KCNK16Q96T55 309 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 RMI1Q9H9A7 625 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 NMRK1Q9NWW6 199 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 TRIM49P0CI25 452 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 TRIM49CP0CI26 452 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 PDIA2Q13087 525 aaKnown RBP13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 TERB1Q8NA31 727 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 PITPNM2Q9BZ72 1349 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 NCK2O43639 380 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 ORC2Q13416 577 aaPredicted RBP13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 CCDC137Q6PK04 289 aaKnown RBP13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 BBS7Q8IWZ6 715 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 ATP11CQ8NB49 1132 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 ASAP3Q8TDY4 903 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 XPO6Q96QU8 1125 aaKnown RBP13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 DDX47Q9H0S4 455 aaKnown RBP13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 CAAP1Q9H8G2 361 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 EXOSC4Q9NPD3 245 aaKnown RBP13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 PRPF4O43172 522 aaKnown RBP eCLIP13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 MYBL1P10243 752 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 BYSLQ13895 437 aaKnown RBP13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 RCN1Q15293 331 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 OLFML1Q6UWY5 402 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 CMTM5Q96DZ9 223 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 NLRP4Q96MN2 994 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 NUP85Q9BW27 656 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 HSPA13P48723 471 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 ATXN3P54252 364 aaPredicted RBP13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 PCDHA4Q9UN74 947 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 E7ENQ6 273 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 FGAP02671 866 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 BFSP2Q13515 415 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 ARHGAP17Q68EM7 881 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 ZNF544Q6NX49 715 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 ZNF507Q8TCN5 953 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 NDUFA13Q9P0J0 144 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 SNX30Q5VWJ9 437 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 NMD3Q96D46 503 aaKnown RBP13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 GGPS1O95749 300 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 TBC1D10BQ4KMP7 808 aaPredicted RBP13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 PKN3Q6P5Z2 889 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 OSBPL10Q9BXB5 764 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 AGTP01019 485 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 GTF2IP78347 998 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 TRIP4Q15650 581 aaPredicted RBP13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 NANOGNBQ7Z5D8 188 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 EGFL8Q99944 293 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 BPIFA3Q9BQP9 254 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 ARHGEF3Q9NR81 526 aa13.9□□□□□ -0.18
SRGAP3-201ENST00000360413 DENND3A2RUS2 1198 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 ZW10O43264 779 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 TRAPPC3O43617 180 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 CCNE1P24864 410 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 CCDC81Q6ZN84 652 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 MIGA2Q7L4E1 593 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 VPS37AQ8NEZ2 397 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 VPS50Q96JG6 964 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 OSBPL5Q9H0X9 879 aaPredicted RBP13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 SP110Q9HB58 689 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 C20orf96Q9NUD7 363 aaPredicted RBP13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 MCM8Q9UJA3 840 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 MOSPD1Q9UJG1 213 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 ZCCHC18P0CG32 403 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 ZNF667Q5HYK9 610 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 BEST2Q8NFU1 509 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 TRABDQ9H4I3 376 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 SMAPO00193 183 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 ENOSF1Q7L5Y1 443 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 COA7Q96BR5 231 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 TMEM161AQ9NX61 479 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 CEP72Q9P209 647 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 ASNA1O43681 348 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 CNGA2Q16280 664 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 RNF135Q8IUD6 432 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 KIAA0825Q8IV33 1275 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 C2orf40Q9H1Z8 148 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 RANBP17Q9H2T7 1088 aaKnown RBP13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 RPAP1Q9BWH6 1393 aaPredicted RBP13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 FAM187AA6NFU0 413 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 MYO1GB0I1T2 1018 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 DYRK3O43781 588 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 RALAP11233 206 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 NSUN7Q8NE18 718 aaKnown RBP13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 GLMNQ92990 594 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 SGSM3Q96HU1 749 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 ZFYVE1Q9HBF4 777 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 VPS9D1Q9Y2B5 631 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 HEY1Q9Y5J3 304 aa13.89□□□□□ -0.19
SRGAP3-201ENST00000360413 ATP1A1P05023 1023 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms