RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 HIST2H2AA3Q6FI13 130 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 TTC39CQ8N584 583 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 ZNF614Q8N883 585 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 ELMO2Q96JJ3 720 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 C17orf80Q9BSJ5 609 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.36□□□□□ -0.91
CTNND1-201ENST00000358694 NUP85Q9BW27 656 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 RPS6KB2Q9UBS0 482 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 PNMA8BQ9ULN7 279 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-201ENST00000358694 A0A1W2PP64 1363 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 TIAM1Q13009 1591 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 C16orf96A6NNT2 1141 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 USP17L5A8MUK1 530 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 LRRC63Q05C16 580 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 TWF1Q12792 350 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 KRT31Q15323 416 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 ARHGAP15Q53QZ3 475 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 PTRHD1Q6GMV3 140 aaKnown RBP9.36□□□□□ -0.91
CTNND1-201ENST00000358694 KLHL24Q6TFL4 600 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 CDR2LQ86X02 465 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-201ENST00000358694 DGKHQ86XP1 1220 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 USP33Q8TEY7 942 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 TNIP3Q96KP6 325 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 APOL5Q9BWW9 433 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 BRIP1Q9BX63 1249 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 POLR3FQ9H1D9 316 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-201ENST00000358694 POLE3Q9NRF9 147 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 SAMSN1Q9NSI8 373 aaKnown RBP9.36□□□□□ -0.91
CTNND1-201ENST00000358694 SYBUQ9NX95 663 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 TMEM63CQ9P1W3 806 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 SPASTQ9UBP0 616 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 NRBP1Q9UHY1 535 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 PRXQ9BXM0 1461 aa9.36□□□□□ -0.91
CTNND1-201ENST00000358694 CFAP99D6REC4 459 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 EIF2S1P05198 315 aaKnown RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 CAPN1P07384 714 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 ACTR2P61160 394 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 TBC1D22BQ9NU19 505 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 KIAA0586Q9BVV6 1533 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 C3orf70A6NLC5 250 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 MIF4GDA9UHW6 222 aaKnown RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 HPGDP15428 266 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 PHKG2P15735 406 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 RPS7P62081 194 aaKnown RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 DYNC1I2Q13409 638 aaKnown RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 SGO1Q5FBB7 561 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 TRAF7Q6Q0C0 670 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 ZNF438Q7Z4V0 828 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 OR6J1Q8NGC5 347 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 DCAF4Q8WV16 495 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 ASZ1Q8WWH4 475 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 EAF2Q96CJ1 260 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 VPS50Q96JG6 964 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 BBS2Q9BXC9 721 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 FHDC1Q9C0D6 1143 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 KRCC1Q9NPI7 259 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 ADGRA2Q96PE1 1338 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 AKAP10O43572 662 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 CDK8P49336 464 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 CDH6P55285 790 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 YWHAZP63104 245 aaKnown RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 GPSM2P81274 684 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 PUS3Q9BZE2 481 aaKnown RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 SEC31BQ9NQW1 1179 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 GALNT8Q9NY28 637 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 EHD2Q9NZN4 543 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 ZFATQ9P243 1243 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 HDAC6Q9UBN7 1215 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 PLB1Q6P1J6 1458 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 F8W810 466 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 CHL1O00533 1208 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 H2AFYO75367 372 aaKnown RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 PALMO75781 387 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 CTSHP09668 335 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 SSTR3P32745 418 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 STAT3P40763 770 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 SARM1Q6SZW1 724 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 ZNF564Q8TBZ8 553 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 PABPC5Q96DU9 382 aaKnown RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 ZSWIM6Q9HCJ5 1215 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 NSMCE4AQ9NXX6 385 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 GABBR1Q9UBS5 961 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 SLC25A13Q9UJS0 675 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 DNMBPQ6XZF7 1577 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 A0A1W2PQ27 194 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 A0A1W2PQ64 194 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 A0A1W2PQD8 194 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 CCDC188H7C350 402 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 NDUFA10O95299 355 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 COPB2P35606 906 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 MRPS25P82663 173 aaKnown RBP9.35□□□□□ -0.91
CTNND1-201ENST00000358694 KRT76Q01546 638 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 MTHFD1LQ6UB35 978 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 ATPAF2Q8N5M1 289 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 SHCBP1Q8NEM2 672 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 CYGBQ8WWM9 190 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 GOLPH3LQ9H4A5 285 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 RNF146Q9NTX7 359 aa9.35□□□□□ -0.91
CTNND1-201ENST00000358694 ARHGEF38Q9NXL2 777 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms