RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 FAM122AQ96E09 287 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 C12orf42Q96LP6 360 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 DNAJC7Q99615 494 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ALG1Q9BT22 464 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 TRIM7Q9C029 511 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 RANBP17Q9H2T7 1088 aaKnown RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 DMAP1Q9NPF5 467 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 INCENPQ9NQS7 918 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 KCND2Q9NZV8 630 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 TBC1D7Q9P0N9 293 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 SEC63Q9UGP8 760 aaKnown RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 ZMYND8Q9ULU4 1186 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 NOVA2Q9UNW9 492 aaKnown RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 SLC45A1Q9Y2W3 748 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 LUC7L2Q9Y383 392 aaKnown RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 SRPRBQ9Y5M8 271 aaKnown RBP4.3□□□□□ -1.72
CNGA1-201ENST00000358519 NFS1Q9Y697 457 aa4.3□□□□□ -1.72
CNGA1-201ENST00000358519 CYP3A7-CYP3A51PA0A087WV96 503 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 C19orf81C9J6K1 198 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CTNND1O60716 968 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 UBOX5O94941 541 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 PENKP01210 267 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 DESP17661 470 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 TCP1P17987 556 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 GNAZP19086 355 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 RASA1P20936 1047 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 EIF4BP23588 611 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CYP3A7P24462 503 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CTNNA1P35221 906 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 HSD17B3P37058 310 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 HSPA9P38646 679 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CHRNA4P43681 627 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CDK8P49336 464 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 COPB1P53618 953 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 HIRAP54198 1017 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 MAGOHP61326 146 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 AMPD3Q01432 767 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CYP27A1Q02318 531 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 UBXN1Q04323 297 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 GRIN1Q05586 938 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 ZNF844Q08AG5 666 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 KIF5AQ12840 1032 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CBLBQ13191 982 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 AOC3Q16853 763 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 C4orf48Q5BLP8 95 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 RUFY4Q6ZNE9 571 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CYB5R4Q7L1T6 521 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 VASH1Q7L8A9 365 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 OTOP1Q7RTM1 612 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CACNA2D4Q7Z3S7 1137 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 ENAHQ8N8S7 591 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 KRI1Q8N9T8 703 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 PROCA1Q8NCQ7 364 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 RDM1Q8NG50 284 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 TRPM4Q8TD43 1214 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CHURC1Q8WUH1 139 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CASKIN2Q8WXE0 1202 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 MAGOHBQ96A72 148 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 KLHL29Q96CT2 875 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 IFT43Q96FT9 208 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 MBOAT7Q96N66 472 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 ZNF317Q96PQ6 595 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 TRAPPC9Q96Q05 1148 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 XPO6Q96QU8 1125 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 WDR18Q9BV38 432 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 OXCT2Q9BYC2 517 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CCSER1Q9C0I3 900 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 VCXQ9H320 206 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 ECT2Q9H8V3 914 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 POLMQ9NP87 494 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 ARHGEF3Q9NR81 526 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 ABCF3Q9NUQ8 709 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 BARHL2Q9NY43 387 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 TAB2Q9NYJ8 693 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 NKX1-2Q9UD57 310 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 SUN2Q9UH99 717 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 LIMA1Q9UHB6 759 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 GGT7Q9UJ14 662 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 PTPN22Q9Y2R2 807 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 BZW2Q9Y6E2 419 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 NDUFB9Q9Y6M9 179 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CAPN6Q9Y6Q1 641 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 UBE4BO95155 1302 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 SCN9AQ15858 1988 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 PNMA6FA0A0J9YX94 578 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 ATP2A1O14983 1001 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 DKC1O60832 514 aaKnown RBP eCLIP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 TACC1O75410 805 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CYP3A4P08684 503 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 FAM200BP0CF97 657 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 MX2P20592 715 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 RPL13P26373 211 aaKnown RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 GSTT1P30711 240 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 CYLC1P35663 651 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 BPIFB4P59827 614 aa4.29□□□□□ -1.72
CNGA1-201ENST00000358519 LACTBP83111 547 aaPredicted RBP4.29□□□□□ -1.72
CNGA1-201ENST00000358519 PABPC4Q13310 644 aaKnown RBP eCLIP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms