RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 CCDC125Q86Z20 511 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ACSBG1Q96GR2 724 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TSSK1BQ9BXA7 367 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 MKS1Q9NXB0 559 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 CCPG1Q9ULG6 757 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 NINQ8N4C6 2090 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 MAGEC1O60732 1142 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 MTA2O94776 668 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 RDM1Q8NG50 284 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 KLHL4Q9C0H6 718 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SPEF2Q9C093 1822 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SERPINB2P05120 415 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 COPAP53621 1224 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 KBTBD12Q3ZCT8 623 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TMEM139Q8IV31 216 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TRIML2Q8N7C3 387 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SEC14L1Q92503 715 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SDCCAG3Q96C92 435 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 EYA3Q99504 573 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 KCNA6P17658 529 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 KLC2Q9H0B6 622 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 NLRC4Q9NPP4 1024 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 STX18Q9P2W9 335 aaKnown RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 GTF3C4Q9UKN8 822 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 SLC12A4Q9UP95 1085 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 ALKQ9UM73 1620 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 TYW5A2RUC4 315 aaKnown RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 M0R2C6 588 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 GIPC1O14908 333 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 KRT6AP02538 564 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 KRT6BP04259 564 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 TMEM35BQ8NCS4 154 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 GINM1Q9NU53 330 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 DEPDC5O75140 1603 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 SMIM23A6NLE4 172 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 GALNTL6Q49A17 601 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 COLGALT2Q8IYK4 626 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 SIX6OS1Q8N1H7 587 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 FAM133AQ8N9E0 248 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 RBM46Q8TBY0 533 aaKnown RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 PLGRKTQ9HBL7 147 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 SLC39A2Q9NP94 309 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 LNPEPQ9UIQ6 1025 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 TULP4Q9NRJ4 1543 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 DNA2P51530 1060 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 LRRC74BQ6ZQY2 392 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 CYB5R4Q7L1T6 521 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 TLCD1Q96CP7 247 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 RMDN1Q96DB5 314 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 CCDC97Q96F63 343 aaPredicted RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 MAGEB5Q9BZ81 275 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 AGPAT5Q9NUQ2 364 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 POLD2P49005 469 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 CMTR1Q8N1G2 835 aaKnown RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 ANKRD42Q8N9B4 389 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 EXD1Q8NHP7 514 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 KPNA4O00629 521 aaPredicted RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 TBC1D12O60347 775 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 TECP42680 631 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 GRAMD1BQ3KR37 738 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 HYIQ5T013 277 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 EZH1Q92800 747 aaPredicted RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 KPNA7A9QM74 516 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 IDO1P14902 403 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 LONP2Q86WA8 852 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 LEMD2Q8NC56 503 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 ARL8AQ96BM9 186 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 PRPF19Q9UMS4 504 aaKnown RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 INO80Q9ULG1 1556 aaPredicted RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 GSG1L2A8MUP6 293 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 H0YJX3 145 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 PRPF4O43172 522 aaKnown RBP eCLIP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 ADGRG6Q86SQ4 1221 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 CLMNQ96JQ2 1002 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 IRAK4Q9NWZ3 460 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 PRDX6P30041 224 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 PRPSAP1Q14558 356 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 NAIF1Q69YI7 327 aaPredicted RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 LINC00299Q6ZSB3 139 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 MYCT1Q8N699 235 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 BLZF1Q9H2G9 400 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 AMACRQ9UHK6 382 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 GLI2P10070 1586 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 DNAJB5O75953 348 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 ATP2B4P23634 1241 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 HIC1Q14526 733 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 C3orf62Q6ZUJ4 267 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 FTCDO95954 541 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 STK4Q13043 487 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 HELBQ8NG08 1087 aaPredicted RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 TTC1Q99614 292 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 CYP39A1Q9NYL5 469 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 PTPRMP28827 1452 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 TPBGLP0DKB5 382 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 CCNB1P14635 433 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 SEC24CP53992 1094 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 KLHDC4Q8TBB5 520 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 ILKAPQ9H0C8 392 aaPredicted RBP4.35□□□□□ -1.71
SYNE2-204ENST00000358025 INTS13Q9NVM9 706 aa4.35□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF827Q17R98 1081 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms