RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 IFT122Q9HBG6 1241 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 JRKLQ9Y4A0 524 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 CA12O43570 354 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 TACC1O75410 805 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 HOXC8P31273 242 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 MFAP3P55082 362 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 KYAT1Q16773 422 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 ZNF410Q86VK4 478 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 RNF149Q8NC42 400 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 LNX1Q8TBB1 728 aaPredicted RBP18.62■□□□□ 0.57
VPS13B-201ENST00000355155 KREMEN1Q96MU8 473 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 CFHR5Q9BXR6 569 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 CNTN6Q9UQ52 1028 aa18.62■□□□□ 0.57
VPS13B-201ENST00000355155 MBLAC1A4D2B0 266 aaPredicted RBP18.61■□□□□ 0.57
VPS13B-201ENST00000355155 NCBP1Q09161 790 aaKnown RBP18.61■□□□□ 0.57
VPS13B-201ENST00000355155 PCBP1Q15365 356 aaKnown RBP eCLIP18.61■□□□□ 0.57
VPS13B-201ENST00000355155 MPZL3Q6UWV2 235 aa18.61■□□□□ 0.57
VPS13B-201ENST00000355155 WDR49Q8IV35 697 aa18.61■□□□□ 0.57
VPS13B-201ENST00000355155 ZNF710Q8N1W2 664 aa18.61■□□□□ 0.57
VPS13B-201ENST00000355155 CEP112Q8N8E3 955 aa18.61■□□□□ 0.57
VPS13B-201ENST00000355155 KLRC1P26715 233 aa18.61■□□□□ 0.57
VPS13B-201ENST00000355155 PHKA2P46019 1235 aa18.61■□□□□ 0.57
VPS13B-201ENST00000355155 HADHBP55084 474 aaKnown RBP18.61■□□□□ 0.57
VPS13B-201ENST00000355155 ADAM17P78536 824 aa18.61■□□□□ 0.57
VPS13B-201ENST00000355155 PRPF4BQ13523 1007 aaKnown RBP18.61■□□□□ 0.57
VPS13B-201ENST00000355155 GJC2Q5T442 439 aaPredicted RBP18.61■□□□□ 0.57
VPS13B-201ENST00000355155 LRRC71Q8N4P6 559 aa18.61■□□□□ 0.57
VPS13B-201ENST00000355155 ZBTB45Q96K62 511 aaPredicted RBP18.61■□□□□ 0.57
VPS13B-201ENST00000355155 FOXN3O00409 490 aaPredicted RBP18.6■□□□□ 0.57
VPS13B-201ENST00000355155 SMC1BQ8NDV3 1235 aa18.6■□□□□ 0.57
VPS13B-201ENST00000355155 TAS1R2Q8TE23 839 aa18.6■□□□□ 0.57
VPS13B-201ENST00000355155 NT5C1BQ96P26 610 aa18.6■□□□□ 0.57
VPS13B-201ENST00000355155 UBE2TQ9NPD8 197 aaPredicted RBP18.6■□□□□ 0.57
VPS13B-201ENST00000355155 RBAKQ9NYW8 714 aaPredicted RBP18.6■□□□□ 0.57
VPS13B-201ENST00000355155 ADAMTS1Q9UHI8 967 aa18.6■□□□□ 0.57
VPS13B-201ENST00000355155 KIF3CO14782 793 aa18.6■□□□□ 0.57
VPS13B-201ENST00000355155 CLDN3O15551 220 aa18.6■□□□□ 0.57
VPS13B-201ENST00000355155 MAP2K1Q02750 393 aaPredicted RBP18.6■□□□□ 0.57
VPS13B-201ENST00000355155 TSKSQ9UJT2 592 aa18.6■□□□□ 0.57
VPS13B-201ENST00000355155 DUSP10Q9Y6W6 482 aa18.6■□□□□ 0.57
VPS13B-201ENST00000355155 ALDH1A1P00352 501 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 TMOD1P28289 359 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 WNT7BP56706 349 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 GRIK4Q16099 956 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 ALKBH5Q6P6C2 394 aaKnown RBP18.59■□□□□ 0.57
VPS13B-201ENST00000355155 SRGAP1Q7Z6B7 1085 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 TRAPPC12Q8WVT3 735 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 NOX5Q96PH1 765 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 SALL4Q9UJQ4 1053 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 NOCTQ9UK39 431 aaKnown RBP18.59■□□□□ 0.57
VPS13B-201ENST00000355155 EVPLQ92817 2033 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 B4GALT4O60513 344 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 VNN1O95497 513 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 TDRD10Q5VZ19 366 aaKnown RBP18.59■□□□□ 0.57
VPS13B-201ENST00000355155 RHPN2Q8IUC4 686 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 UBR7Q8N806 425 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 KAT2BQ92831 832 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 SUGCTQ9HAC7 445 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 TFR2Q9UP52 801 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 DOCK3Q8IZD9 2030 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 CES2O00748 559 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 MCF2P10911 925 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 ITIH3Q06033 890 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 ALS2CR12Q96Q35 445 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 AGPAT1Q99943 283 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 ISCUQ9H1K1 167 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 TOPORSQ9NS56 1045 aaPredicted RBP18.59■□□□□ 0.57
VPS13B-201ENST00000355155 ZHX1Q9UKY1 873 aaPredicted RBP18.59■□□□□ 0.57
VPS13B-201ENST00000355155 CAPN6Q9Y6Q1 641 aa18.59■□□□□ 0.57
VPS13B-201ENST00000355155 NRCAMQ92823 1304 aa18.58■□□□□ 0.57
VPS13B-201ENST00000355155 TTLL13PA6NNM8 815 aa18.58■□□□□ 0.57
VPS13B-201ENST00000355155 TMEM253P0C7T8 217 aa18.58■□□□□ 0.57
VPS13B-201ENST00000355155 GZMAP12544 262 aa18.58■□□□□ 0.57
VPS13B-201ENST00000355155 CLCN3P51790 818 aa18.58■□□□□ 0.57
VPS13B-201ENST00000355155 CRHR2Q13324 411 aa18.58■□□□□ 0.57
VPS13B-201ENST00000355155 ATF7IP2Q5U623 682 aa18.58■□□□□ 0.57
VPS13B-201ENST00000355155 SLFN11Q7Z7L1 901 aa18.58■□□□□ 0.57
VPS13B-201ENST00000355155 CCDC127Q96BQ5 260 aa18.58■□□□□ 0.57
VPS13B-201ENST00000355155 POP1Q99575 1024 aaKnown RBP18.58■□□□□ 0.57
VPS13B-201ENST00000355155 PTPRJQ12913 1337 aa18.58■□□□□ 0.56
VPS13B-201ENST00000355155 SMIM35A0A1B0GVV1 85 aa18.58■□□□□ 0.56
VPS13B-201ENST00000355155 ZNF286BP0CG31 522 aa18.58■□□□□ 0.56
VPS13B-201ENST00000355155 PPFIA1Q13136 1202 aa18.58■□□□□ 0.56
VPS13B-201ENST00000355155 IFI16Q16666 785 aaKnown RBP18.58■□□□□ 0.56
VPS13B-201ENST00000355155 FNBP1Q96RU3 617 aa18.58■□□□□ 0.56
VPS13B-201ENST00000355155 UPF3AQ9H1J1 476 aaKnown RBP18.58■□□□□ 0.56
VPS13B-201ENST00000355155 TMEM88BA6NKF7 163 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 KPNA6O60684 536 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 IL18RAPO95256 599 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 ZNF677Q86XU0 584 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 RPGRIP1Q96KN7 1286 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 THSD7BQ9C0I4 1608 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 SRGAP2CP0DJJ0 459 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 CPT1AP50416 773 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 ZBTB41Q5SVQ8 909 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 EPS8L1Q8TE68 723 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 CARD6Q9BX69 1037 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 ADAMTS10Q9H324 1103 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 SNX12Q9UMY4 172 aa18.57■□□□□ 0.56
VPS13B-201ENST00000355155 ZEB2O60315 1214 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms