RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 ECHDC2Q86YB7 292 aa26.41■■□□□ 1.82
HMGA2-201ENST00000354636 TMEM192Q8IY95 271 aa26.41■■□□□ 1.82
HMGA2-201ENST00000354636 RDH13Q8NBN7 331 aa26.41■■□□□ 1.82
HMGA2-201ENST00000354636 MKNK1Q9BUB5 465 aa26.41■■□□□ 1.82
HMGA2-201ENST00000354636 SMTNL1A8MU46 457 aa26.4■■□□□ 1.82
HMGA2-201ENST00000354636 FGFR1OPO95684 399 aaKnown RBP26.4■■□□□ 1.82
HMGA2-201ENST00000354636 CLTAP09496 248 aa26.4■■□□□ 1.82
HMGA2-201ENST00000354636 ATF7P17544 494 aaPredicted RBP26.4■■□□□ 1.82
HMGA2-201ENST00000354636 OSTNP61366 133 aa26.4■■□□□ 1.82
HMGA2-201ENST00000354636 SNRNP35Q16560 246 aaKnown RBP26.4■■□□□ 1.82
HMGA2-201ENST00000354636 ZNF598Q86UK7 904 aaKnown RBP26.4■■□□□ 1.82
HMGA2-201ENST00000354636 GAS2L3Q86XJ1 694 aa26.4■■□□□ 1.82
HMGA2-201ENST00000354636 CBWD2Q8IUF1 395 aa26.4■■□□□ 1.82
HMGA2-201ENST00000354636 NOC3LQ8WTT2 800 aaKnown RBP26.4■■□□□ 1.82
HMGA2-201ENST00000354636 SNTG2Q9NY99 539 aa26.4■■□□□ 1.82
HMGA2-201ENST00000354636 FRMD4BQ9Y2L6 1034 aa26.4■■□□□ 1.82
HMGA2-201ENST00000354636 ZNF233A6NK53 670 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 EFCAB14O75071 495 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 BAIAP3O94812 1187 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 FGBP02675 491 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 PSMC2P35998 433 aaKnown RBP26.39■■□□□ 1.82
HMGA2-201ENST00000354636 POU5F1Q01860 360 aaKnown RBP26.39■■□□□ 1.82
HMGA2-201ENST00000354636 HSP90AA2PQ14568 343 aaPredicted RBP26.39■■□□□ 1.82
HMGA2-201ENST00000354636 TMEM240Q5SV17 173 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 ZNF365Q70YC5 407 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 OTOP2Q7RTS6 562 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 LUZP1Q86V48 1076 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 IRF2BP1Q8IU81 584 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 ACAP3Q96P50 834 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 CCDC94Q9BW85 323 aaPredicted RBP26.39■■□□□ 1.82
HMGA2-201ENST00000354636 RNF39Q9H2S5 420 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 THAP9Q9H5L6 903 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 SAMSN1Q9NSI8 373 aaKnown RBP26.39■■□□□ 1.82
HMGA2-201ENST00000354636 FANCLQ9NW38 375 aa26.39■■□□□ 1.82
HMGA2-201ENST00000354636 BECN2A8MW95 431 aa26.39■■□□□ 1.81
HMGA2-201ENST00000354636 MAPK13O15264 365 aa26.39■■□□□ 1.81
HMGA2-201ENST00000354636 EOMESO95936 686 aa26.39■■□□□ 1.81
HMGA2-201ENST00000354636 MAGEA10P43363 369 aaPredicted RBP26.39■■□□□ 1.81
HMGA2-201ENST00000354636 PSRC1Q6PGN9 363 aaPredicted RBP26.39■■□□□ 1.81
HMGA2-201ENST00000354636 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.39■■□□□ 1.81
HMGA2-201ENST00000354636 HACE1Q8IYU2 909 aa26.39■■□□□ 1.81
HMGA2-201ENST00000354636 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.39■■□□□ 1.81
HMGA2-201ENST00000354636 HSD3B7Q9H2F3 369 aa26.39■■□□□ 1.81
HMGA2-201ENST00000354636 ELAC1Q9H777 363 aaKnown RBP26.39■■□□□ 1.81
HMGA2-201ENST00000354636 H0YGN5 161 aa26.38■■□□□ 1.81
HMGA2-201ENST00000354636 SLC16A3O15427 465 aaKnown RBP26.38■■□□□ 1.81
HMGA2-201ENST00000354636 ADRB2P07550 413 aa26.38■■□□□ 1.81
HMGA2-201ENST00000354636 ENOX2Q16206 610 aaKnown RBP26.38■■□□□ 1.81
HMGA2-201ENST00000354636 FAM186BQ8IYM0 893 aa26.38■■□□□ 1.81
HMGA2-201ENST00000354636 CRIPAKQ8N1N5 446 aa26.38■■□□□ 1.81
HMGA2-201ENST00000354636 PGBD4Q96DM1 585 aa26.38■■□□□ 1.81
HMGA2-201ENST00000354636 BORCS6Q96GS4 357 aa26.38■■□□□ 1.81
HMGA2-201ENST00000354636 APOL6Q9BWW8 343 aa26.38■■□□□ 1.81
HMGA2-201ENST00000354636 TNRC18O15417 2968 aaPredicted RBP26.38■■□□□ 1.81
HMGA2-201ENST00000354636 MEIS3P2A8K0S8 358 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 MEFVO15553 781 aaPredicted RBP26.37■■□□□ 1.81
HMGA2-201ENST00000354636 RECQL4O94761 1208 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 GNA14O95837 355 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 EPB41P11171 864 aaKnown RBP26.37■■□□□ 1.81
HMGA2-201ENST00000354636 ITGA4P13612 1032 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 AKAP5P24588 427 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 SLC10A6Q3KNW5 377 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 AGMOQ6ZNB7 445 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 BRSK2Q8IWQ3 736 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 RNF169Q8NCN4 708 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 MFSD14AQ96MC6 490 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 RPF1Q9H9Y2 349 aaKnown RBP26.37■■□□□ 1.81
HMGA2-201ENST00000354636 TMEM161AQ9NX61 479 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 RBAKQ9NYW8 714 aaPredicted RBP26.37■■□□□ 1.81
HMGA2-201ENST00000354636 TTC3P53804 2025 aa26.37■■□□□ 1.81
HMGA2-201ENST00000354636 ZBBXA8MT70 800 aa26.36■■□□□ 1.81
HMGA2-201ENST00000354636 CXCL8P10145 99 aa26.36■■□□□ 1.81
HMGA2-201ENST00000354636 MARSP56192 900 aaKnown RBP26.36■■□□□ 1.81
HMGA2-201ENST00000354636 WDR5P61964 334 aaKnown RBP26.36■■□□□ 1.81
HMGA2-201ENST00000354636 MLLT1Q03111 559 aaPredicted RBP26.36■■□□□ 1.81
HMGA2-201ENST00000354636 CDKAL1Q5VV42 579 aa26.36■■□□□ 1.81
HMGA2-201ENST00000354636 LPPQ93052 612 aa26.36■■□□□ 1.81
HMGA2-201ENST00000354636 TULP1O00294 542 aaPredicted RBP26.35■■□□□ 1.81
HMGA2-201ENST00000354636 YARSP54577 528 aaKnown RBP26.35■■□□□ 1.81
HMGA2-201ENST00000354636 CYP24A1Q07973 514 aa26.35■■□□□ 1.81
HMGA2-201ENST00000354636 FRMD5Q7Z6J6 570 aa26.35■■□□□ 1.81
HMGA2-201ENST00000354636 RNF214Q8ND24 703 aa26.35■■□□□ 1.81
HMGA2-201ENST00000354636 TOPORSQ9NS56 1045 aaPredicted RBP26.35■■□□□ 1.81
HMGA2-201ENST00000354636 PARP2Q9UGN5 583 aa26.35■■□□□ 1.81
HMGA2-201ENST00000354636 GIT1Q9Y2X7 761 aa26.35■■□□□ 1.81
HMGA2-201ENST00000354636 TTC26A0AVF1 554 aa26.34■■□□□ 1.81
HMGA2-201ENST00000354636 ZNF18P17022 549 aa26.34■■□□□ 1.81
HMGA2-201ENST00000354636 KCNJ6P48051 423 aa26.34■■□□□ 1.81
HMGA2-201ENST00000354636 MCCD1P59942 119 aaPredicted RBP26.34■■□□□ 1.81
HMGA2-201ENST00000354636 HSP90AA4PQ58FG1 418 aa26.34■■□□□ 1.81
HMGA2-201ENST00000354636 ALKAL1Q6UXT8 129 aa26.34■■□□□ 1.81
HMGA2-201ENST00000354636 INTS8Q75QN2 995 aaKnown RBP26.34■■□□□ 1.81
HMGA2-201ENST00000354636 FAM114A1Q8IWE2 563 aa26.34■■□□□ 1.81
HMGA2-201ENST00000354636 HERVK_113Q902F9 699 aa26.34■■□□□ 1.81
HMGA2-201ENST00000354636 CNOT6LQ96LI5 555 aaKnown RBP26.34■■□□□ 1.81
HMGA2-201ENST00000354636 PLEKHA5Q9HAU0 1116 aa26.34■■□□□ 1.81
HMGA2-201ENST00000354636 METTL14Q9HCE5 456 aaKnown RBP26.34■■□□□ 1.81
HMGA2-201ENST00000354636 UBN1Q9NPG3 1134 aa26.34■■□□□ 1.81
HMGA2-201ENST00000354636 RNF216Q9NWF9 866 aaPredicted RBP26.34■■□□□ 1.81
HMGA2-201ENST00000354636 PCDHB7Q9Y5E2 793 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms