RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 NIPA1Q7RTP0 329 aa13□□□□□ -0.33
DDX4-201ENST00000353507 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
DDX4-201ENST00000353507 SLC17A8Q8NDX2 589 aa13□□□□□ -0.33
DDX4-201ENST00000353507 ART4Q93070 314 aa13□□□□□ -0.33
DDX4-201ENST00000353507 TIPINQ9BVW5 301 aa13□□□□□ -0.33
DDX4-201ENST00000353507 KDM4CQ9H3R0 1056 aa13□□□□□ -0.33
DDX4-201ENST00000353507 ST6GALNAC4Q9H4F1 302 aa13□□□□□ -0.33
DDX4-201ENST00000353507 HAUS2Q9NVX0 235 aa13□□□□□ -0.33
DDX4-201ENST00000353507 COL20A1Q9P218 1284 aa13□□□□□ -0.33
DDX4-201ENST00000353507 ZNF70Q9UC06 446 aaPredicted RBP13□□□□□ -0.33
DDX4-201ENST00000353507 BRWD3Q6RI45 1802 aa13□□□□□ -0.33
DDX4-201ENST00000353507 TMEM150BA6NC51 233 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 NFIBO00712 420 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 CHUKO15111 745 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 DHX15O43143 795 aaKnown RBP12.99□□□□□ -0.33
DDX4-201ENST00000353507 LLGL1Q15334 1064 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 LACTB2Q53H82 288 aaPredicted RBP12.99□□□□□ -0.33
DDX4-201ENST00000353507 SGO2Q562F6 1265 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 UBAP2Q5T6F2 1119 aaKnown RBP12.99□□□□□ -0.33
DDX4-201ENST00000353507 FLAD1Q8NFF5 587 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 CCT6BQ92526 530 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 SEMA4DQ92854 862 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 ZNF317Q96PQ6 595 aaPredicted RBP12.99□□□□□ -0.33
DDX4-201ENST00000353507 PRMT1Q99873 361 aaKnown RBP12.99□□□□□ -0.33
DDX4-201ENST00000353507 TMEM109Q9BVC6 243 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 ADAM7Q9H2U9 754 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 ASIC3Q9UHC3 531 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 YDJCA8MPS7 323 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 CLDN3O15551 220 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 GHRP10912 638 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 CHRNA5P30532 468 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 IFNAR2P48551 515 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 NCKAP1LP55160 1127 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 SF3A3Q12874 501 aaKnown RBP eCLIP12.99□□□□□ -0.33
DDX4-201ENST00000353507 XKR9Q5GH70 373 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 MIGA2Q7L4E1 593 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 MCF2L2Q86YR7 1114 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 LRRC34Q8IZ02 419 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 C12orf50Q8NA57 414 aaPredicted RBP12.99□□□□□ -0.33
DDX4-201ENST00000353507 DYDC1Q8WWB3 177 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 CNKSR1Q969H4 720 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 GLIS2Q9BZE0 524 aaPredicted RBP12.99□□□□□ -0.33
DDX4-201ENST00000353507 TMEM8AQ9HCN3 771 aa12.99□□□□□ -0.33
DDX4-201ENST00000353507 ASAP2O43150 1006 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 LYPLA2O95372 231 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 KRT5P13647 590 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 CAP2P40123 477 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 KRT17Q04695 432 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 SNCBQ16143 134 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 CCDC38Q502W7 563 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 CYB5D1Q6P9G0 228 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 TRMT10CQ7L0Y3 403 aaKnown RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 USP37Q86T82 979 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 CPXCR1Q8N123 301 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 FBXL13Q8NEE6 735 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 SUPT20HQ8NEM7 779 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 AKT1S1Q96B36 256 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 CD248Q9HCU0 757 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 HOMER2Q9NSB8 354 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 TBC1D22BQ9NU19 505 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 ANAPC7Q9UJX3 599 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 USP20Q9Y2K6 914 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 ASTN2O75129 1339 aaPredicted RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 CCT8L1PA6NM43 557 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 MAPK4P31152 587 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 SNX1Q13596 522 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 AUHQ13825 339 aaKnown RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 SIX1Q15475 284 aaPredicted RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 UGCGQ16739 394 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 PCNX4Q63HM2 1172 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 PLA2G4FQ68DD2 849 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 FUKQ8N0W3 1084 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 C1orf54Q8WWF1 131 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 SGSM3Q96HU1 749 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 JPH2Q9BR39 696 aaPredicted RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 DEFB129Q9H1M3 183 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 CDC42EP4Q9H3Q1 356 aaKnown RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 LRRC19Q9H756 370 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 YY1AP1Q9H869 796 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 QTRT2Q9H974 415 aaKnown RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 HOMER3Q9NSC5 361 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 TBX20Q9UMR3 447 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 UBIAD1Q9Y5Z9 338 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 ACSL3O95573 720 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 EIF2AK2P19525 551 aaKnown RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 GPC3P51654 580 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 ITIH4Q14624 930 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 ACAD10Q6JQN1 1059 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 TAX1BP1Q86VP1 789 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 CCDC50Q8IVM0 306 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 PARP9Q8IXQ6 854 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 OGFOD1Q8N543 542 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 HELQQ8TDG4 1101 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 PARD3BQ8TEW8 1205 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 POP1Q99575 1024 aaKnown RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 KIFC3Q9BVG8 833 aa12.98□□□□□ -0.33
DDX4-201ENST00000353507 ROPN1BQ9BZX4 212 aaPredicted RBP12.98□□□□□ -0.33
DDX4-201ENST00000353507 ROPN1Q9HAT0 212 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms