RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 WDR78Q5VTH9 848 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 CST9Q5W186 159 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 ENOSF1Q7L5Y1 443 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 GPR142Q7Z601 462 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 IFNLR1Q8IU57 520 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-203ENST00000350034 MSL3Q8N5Y2 521 aaKnown RBP7.48□□□□□ -1.21
TRIM55-203ENST00000350034 NOA1Q8NC60 698 aaKnown RBP7.48□□□□□ -1.21
TRIM55-203ENST00000350034 FBXL13Q8NEE6 735 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 TPCN2Q8NHX9 752 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 PPTC7Q8NI37 304 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 TAS1R2Q8TE23 839 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 COG1Q8WTW3 980 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 U2AF1L4Q8WU68 220 aaKnown RBP7.48□□□□□ -1.21
TRIM55-203ENST00000350034 KAT5Q92993 513 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 CCDC127Q96BQ5 260 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 BICD1Q96G01 975 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 ZBTB45Q96K62 511 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-203ENST00000350034 FAM81BQ96LP2 452 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 NT5C1BQ96P26 610 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 OSBPL9Q96SU4 736 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 MMS19Q96T76 1030 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 POP1Q99575 1024 aaKnown RBP7.48□□□□□ -1.21
TRIM55-203ENST00000350034 AGPAT1Q99943 283 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 PARD6BQ9BYG5 372 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 NFKBIZQ9BYH8 718 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 C2orf40Q9H1Z8 148 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 FZD8Q9H461 694 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 DOCK5Q9H7D0 1870 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 ZCCHC17Q9NP64 241 aaKnown RBP7.48□□□□□ -1.21
TRIM55-203ENST00000350034 TOPORSQ9NS56 1045 aaPredicted RBP7.48□□□□□ -1.21
TRIM55-203ENST00000350034 ZNF446Q9NWS9 450 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 RAB20Q9NX57 234 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 WBP1LQ9NX94 342 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 RNF14Q9UBS8 474 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 NOCTQ9UK39 431 aaKnown RBP7.48□□□□□ -1.21
TRIM55-203ENST00000350034 AGO2Q9UKV8 859 aaKnown RBP7.48□□□□□ -1.21
TRIM55-203ENST00000350034 STXBP5LQ9Y2K9 1186 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 HYOU1Q9Y4L1 999 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 SZT2Q5T011 3432 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 SIP14410 1827 aa7.48□□□□□ -1.21
TRIM55-203ENST00000350034 CCDC151A5D8V7 595 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 TTLL13PA6NNM8 815 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 CES2O00748 559 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 ZNF185O15231 689 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 ASAP2O43150 1006 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 ABCB7O75027 752 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 TOM1L1O75674 476 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 C22orf31O95567 290 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 LGALS2P05162 132 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 TNFAIP3P21580 790 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 MARK3P27448 753 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 MAPK4P31152 587 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 HADHBP55084 474 aaKnown RBP7.47□□□□□ -1.21
TRIM55-203ENST00000350034 PTENP60484 403 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 MCL1Q07820 350 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 BRD3Q15059 726 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 IFI16Q16666 785 aaKnown RBP7.47□□□□□ -1.21
TRIM55-203ENST00000350034 ZBTB41Q5SVQ8 909 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 PLEKHH3Q7Z736 793 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 GLYCTKQ8IVS8 523 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 BRSK2Q8IWQ3 736 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 MMGT1Q8N4V1 131 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 EPS8L1Q8TE68 723 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 SLC20A1Q8WUM9 679 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 HNRNPLLQ8WVV9 542 aaKnown RBP7.47□□□□□ -1.21
TRIM55-203ENST00000350034 RFFLQ8WZ73 363 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 DHX38Q92620 1227 aaKnown RBP7.47□□□□□ -1.21
TRIM55-203ENST00000350034 TATDN2Q93075 761 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 MAML3Q96JK9 1138 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 PCDHB18PQ96TA0 734 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 CGRRF1Q99675 332 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 ACO2Q99798 780 aaKnown RBP7.47□□□□□ -1.21
TRIM55-203ENST00000350034 C16orf70Q9BSU1 422 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 CCDC94Q9BW85 323 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-203ENST00000350034 MRPL4Q9BYD3 311 aaKnown RBP7.47□□□□□ -1.21
TRIM55-203ENST00000350034 ISCUQ9H1K1 167 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 EPC1Q9H2F5 836 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 RNPEPQ9H4A4 650 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 PDE11AQ9HCR9 933 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 PTPRHQ9HD43 1115 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 ABCB6Q9NP58 842 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 ERAP1Q9NZ08 941 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 SUCLA2Q9P2R7 463 aaPredicted RBP7.47□□□□□ -1.21
TRIM55-203ENST00000350034 IVNS1ABPQ9Y6Y0 642 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 PTPRJQ12913 1337 aa7.47□□□□□ -1.21
TRIM55-203ENST00000350034 COL1A2P08123 1366 aa7.46□□□□□ -1.21
TRIM55-203ENST00000350034 TARSL2A2RTX5 802 aaKnown RBP7.46□□□□□ -1.22
TRIM55-203ENST00000350034 ANKRD62A6NC57 917 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 ACKR2O00590 384 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 MAGEB2O15479 319 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 CYP26A1O43174 497 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 ATP8B1O43520 1251 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 NCK2O43639 380 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 PPFIA4O75335 1185 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 MTA2O94776 668 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 SGPL1O95470 568 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 VNN1O95497 513 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 IGHA2P01877 340 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 HLA-DRAP01903 254 aa7.46□□□□□ -1.22
TRIM55-203ENST00000350034 PRKCBP05771 671 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms