RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 IER5Q5VY09 327 aa17.99■□□□□ 0.47
SAMM50-201ENST00000350028 GPAT2Q6NUI2 795 aa17.99■□□□□ 0.47
SAMM50-201ENST00000350028 EEPD1Q7L9B9 569 aa17.99■□□□□ 0.47
SAMM50-201ENST00000350028 NOP9Q86U38 636 aaKnown RBP17.99■□□□□ 0.47
SAMM50-201ENST00000350028 PALB2Q86YC2 1186 aa17.99■□□□□ 0.47
SAMM50-201ENST00000350028 IFT20Q8IY31 132 aa17.99■□□□□ 0.47
SAMM50-201ENST00000350028 SHCBP1Q8NEM2 672 aa17.99■□□□□ 0.47
SAMM50-201ENST00000350028 MORC4Q8TE76 937 aa17.99■□□□□ 0.47
SAMM50-201ENST00000350028 AENQ8WTP8 325 aaKnown RBP17.99■□□□□ 0.47
SAMM50-201ENST00000350028 SCFD2Q8WU76 684 aa17.99■□□□□ 0.47
SAMM50-201ENST00000350028 BBXQ8WY36 941 aaPredicted RBP17.99■□□□□ 0.47
SAMM50-201ENST00000350028 PGRMC1O00264 195 aaKnown RBP17.98■□□□□ 0.47
SAMM50-201ENST00000350028 ADCY3O60266 1144 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 PGK2P07205 417 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 SLC7A5Q01650 507 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 PLPPR4Q7Z2D5 763 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 GTF3C2Q8WUA4 911 aaPredicted RBP17.98■□□□□ 0.47
SAMM50-201ENST00000350028 TCP11Q8WWU5 503 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 ZNF516Q92618 1163 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 GPR20Q99678 358 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.98■□□□□ 0.47
SAMM50-201ENST00000350028 POLR3GO15318 223 aaPredicted RBP17.98■□□□□ 0.47
SAMM50-201ENST00000350028 C4BPAP04003 597 aaKnown RBP17.98■□□□□ 0.47
SAMM50-201ENST00000350028 MYBL2P10244 700 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 CDR2Q01850 454 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 ZACNQ401N2 412 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 WDR44Q5JSH3 913 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 LDLRAD1Q5T700 205 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 TATDN2Q93075 761 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 PCDHB18PQ96TA0 734 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 R3HDMLQ9H3Y0 253 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 C1orf112Q9NSG2 853 aa17.98■□□□□ 0.47
SAMM50-201ENST00000350028 A0A0B4J269 797 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 H3BQF6 201 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 CCDC188H7C350 402 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 ARIH2O95376 493 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 CYP11B1P15538 503 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 TNNI1P19237 187 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 PDE6CP51160 858 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 EFNA5P52803 228 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 EPHB4P54760 987 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 NLRP11P59045 1033 aaKnown RBP17.97■□□□□ 0.47
SAMM50-201ENST00000350028 RNASE9P60153 205 aaKnown RBP17.97■□□□□ 0.47
SAMM50-201ENST00000350028 FMO1Q01740 532 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 DMTNQ08495 405 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 SNAPC2Q13487 334 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 CAPSQ13938 189 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 C11orf63Q6NUN7 778 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 CRELD2Q6UXH1 353 aaPredicted RBP17.97■□□□□ 0.47
SAMM50-201ENST00000350028 ZPBP2Q6X784 338 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 SLC47A2Q86VL8 602 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 GLG1Q92896 1179 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 KRT12Q99456 494 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 TARS2Q9BW92 718 aaKnown RBP17.97■□□□□ 0.47
SAMM50-201ENST00000350028 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.97■□□□□ 0.475e-7■■■■■ 70.5
SAMM50-201ENST00000350028 GDF3Q9NR23 364 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 TTC7AQ9ULT0 858 aaPredicted RBP17.97■□□□□ 0.47
SAMM50-201ENST00000350028 HPCAL4Q9UM19 191 aa17.97■□□□□ 0.47
SAMM50-201ENST00000350028 NOP56O00567 594 aaKnown RBP17.96■□□□□ 0.47
SAMM50-201ENST00000350028 MTA2O94776 668 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 AARSP49588 968 aaKnown RBP eCLIP17.96■□□□□ 0.47
SAMM50-201ENST00000350028 CLUL1Q15846 466 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 HSP90B2PQ58FF3 399 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 TAF3Q5VWG9 929 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 EMBQ6PCB8 327 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 DHX37Q8IY37 1157 aaKnown RBP17.96■□□□□ 0.47
SAMM50-201ENST00000350028 ATP8B4Q8TF62 1192 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 DHX38Q92620 1227 aaKnown RBP17.96■□□□□ 0.47
SAMM50-201ENST00000350028 ZBTB45Q96K62 511 aaPredicted RBP17.96■□□□□ 0.47
SAMM50-201ENST00000350028 JPH2Q9BR39 696 aaPredicted RBP17.96■□□□□ 0.47
SAMM50-201ENST00000350028 MSTO1Q9BUK6 570 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 HAPLN2Q9GZV7 340 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 MED4Q9NPJ6 270 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 RBAKQ9NYW8 714 aaPredicted RBP17.96■□□□□ 0.47
SAMM50-201ENST00000350028 CTTNBP2NLQ9P2B4 639 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 PNMA3Q9UL41 463 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 COG5Q9UP83 839 aa17.96■□□□□ 0.47
SAMM50-201ENST00000350028 UNCXA6NJT0 531 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 ASB14A6NK59 587 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 DDX3YO15523 660 aaKnown RBP17.95■□□□□ 0.46
SAMM50-201ENST00000350028 HEXIM1O94992 359 aaKnown RBP17.95■□□□□ 0.46
SAMM50-201ENST00000350028 HLA-DRAP01903 254 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 MMEP08473 750 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 ACOT2P49753 483 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 SLC26A2P50443 739 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 BPIFB4P59827 614 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 ERVK-9P63128 1117 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 MXD4Q14582 209 aaPredicted RBP17.95■□□□□ 0.46
SAMM50-201ENST00000350028 CCDC62Q6P9F0 684 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 GSPT2Q8IYD1 628 aaKnown RBP17.95■□□□□ 0.46
SAMM50-201ENST00000350028 FAM71BQ8TC56 605 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 PRPF31Q8WWY3 499 aaKnown RBP17.95■□□□□ 0.46
SAMM50-201ENST00000350028 SLC10A4Q96EP9 437 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 CGRRF1Q99675 332 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 RRAGCQ9HB90 399 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 NOC2LQ9Y3T9 749 aaKnown RBP17.95■□□□□ 0.46
SAMM50-201ENST00000350028 ADGRA2Q96PE1 1338 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 ZNFX1Q9P2E3 1918 aaKnown RBP17.95■□□□□ 0.46
SAMM50-201ENST00000350028 IQCA1LA6NCM1 817 aa17.95■□□□□ 0.46
SAMM50-201ENST00000350028 MIF4GDA9UHW6 222 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms