RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 TRIM65Q6PJ69 517 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 SV2AQ7L0J3 742 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 RRAGAQ7L523 313 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 REXO1L1PQ8IX06 675 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 CCAR2Q8N163 923 aaKnown RBP11.92□□□□□ -0.5
ECM1-201ENST00000346569 C7orf31Q8N865 590 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 NLRP7Q8WX94 980 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 CCDC127Q96BQ5 260 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 TCHPQ9BT92 498 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 TMEM8AQ9HCN3 771 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 NLRC4Q9NPP4 1024 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 GCNT4Q9P109 453 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 DAAM1Q9Y4D1 1078 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 SCN10AQ9Y5Y9 1956 aa11.92□□□□□ -0.5
ECM1-201ENST00000346569 A0A1B0GUA9 196 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 LRRC53A6NM62 1247 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 LRRN2O75325 713 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 INHAP05111 366 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 DARSP14868 501 aaKnown RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 ARF4P18085 180 aaPredicted RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 HOXA11P31270 313 aaPredicted RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 TNFSF9P41273 254 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 MYL7Q01449 175 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 PCBP1Q15365 356 aaKnown RBP eCLIP11.91□□□□□ -0.5
ECM1-201ENST00000346569 HGSNATQ68CP4 663 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 PHLDB3Q6NSJ2 640 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 CACNA2D4Q7Z3S7 1137 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 IRF2BP2Q7Z5L9 587 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 ZBTB33Q86T24 672 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 USP37Q86T82 979 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 RPAINQ86UA6 219 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 BRSK2Q8IWQ3 736 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 PCSK9Q8NBP7 692 aaKnown RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 SEMA4DQ92854 862 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 PPP1R16BQ96T49 567 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 GCOM2Q9BZD3 368 aaPredicted RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 INTS2Q9H0H0 1204 aaKnown RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 FAM49AQ9H0Q0 323 aaPredicted RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 CDT1Q9H211 546 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 PDE11AQ9HCR9 933 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 HMX1Q9NP08 348 aaPredicted RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 TOPORSQ9NS56 1045 aaPredicted RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 ZNHIT6Q9NWK9 470 aaKnown RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 ARHGAP20Q9P2F6 1191 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 ANKFY1Q9P2R3 1169 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 AJAP1Q9UKB5 411 aaPredicted RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 FHOD1Q9Y613 1164 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 ADGRG1Q9Y653 693 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 PTCH2Q9Y6C5 1203 aa11.91□□□□□ -0.5
ECM1-201ENST00000346569 EPN1Q9Y6I3 576 aaPredicted RBP11.91□□□□□ -0.5
ECM1-201ENST00000346569 USP27XA6NNY8 438 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 TSPAN1O60635 241 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 MCF2P10911 925 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 EIF4BP23588 611 aaKnown RBP11.9□□□□□ -0.5
ECM1-201ENST00000346569 MATR3P43243 847 aaKnown RBP eCLIP11.9□□□□□ -0.5
ECM1-201ENST00000346569 MXI1P50539 228 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 JAM2P57087 298 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 CETN1Q12798 172 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 ASTE1Q2TB18 679 aaPredicted RBP11.9□□□□□ -0.5
ECM1-201ENST00000346569 ZACNQ401N2 412 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 SEZ6Q53EL9 994 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 IQCEQ6IPM2 695 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 GDF6Q6KF10 455 aaPredicted RBP11.9□□□□□ -0.5
ECM1-201ENST00000346569 TAF2Q6P1X5 1199 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 TOGARAM2Q6ZUX3 1019 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 CDR2LQ86X02 465 aaPredicted RBP11.9□□□□□ -0.5
ECM1-201ENST00000346569 CCDC170Q8IYT3 715 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 TSEN34Q9BSV6 310 aaKnown RBP11.9□□□□□ -0.5
ECM1-201ENST00000346569 STK33Q9BYT3 514 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 MCOLN1Q9GZU1 580 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 PDZD7Q9H5P4 517 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 RBAKQ9NYW8 714 aaPredicted RBP11.9□□□□□ -0.5
ECM1-201ENST00000346569 TRIM17Q9Y577 477 aa11.9□□□□□ -0.5
ECM1-201ENST00000346569 TRIP12Q14669 1992 aaPredicted RBP11.9□□□□□ -0.5
ECM1-201ENST00000346569 B4GALT4O60513 344 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 CABYRO75952 493 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
ECM1-201ENST00000346569 CRYBB1P53674 252 aaPredicted RBP11.89□□□□□ -0.51
ECM1-201ENST00000346569 TMEM62Q0P6H9 643 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 MAPK8IP2Q13387 824 aaPredicted RBP11.89□□□□□ -0.51
ECM1-201ENST00000346569 SURF1Q15526 300 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 ZNF568Q3ZCX4 644 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 SFMBT2Q5VUG0 894 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 GJB7Q6PEY0 223 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 RNF180Q86T96 592 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 CEP120Q8N960 986 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 FBXL13Q8NEE6 735 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 TAS1R2Q8TE23 839 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 CPB2Q96IY4 423 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 FNBP1Q96RU3 617 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 OSMRQ99650 979 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 CGRRF1Q99675 332 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 NHEJ1Q9H9Q4 299 aaPredicted RBP11.89□□□□□ -0.51
ECM1-201ENST00000346569 RAB20Q9NX57 234 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 TRMT1Q9NXH9 659 aaKnown RBP11.89□□□□□ -0.51
ECM1-201ENST00000346569 APEX2Q9UBZ4 518 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 DNAJC12Q9UKB3 198 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 PPP2R2CQ9Y2T4 447 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 PTPRJQ12913 1337 aa11.89□□□□□ -0.51
ECM1-201ENST00000346569 SSU72P8A0A1W2PR75 194 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms