RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 DSC1Q08554 894 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 TUSC3Q13454 348 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 KYAT1Q16773 422 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 ELMSAN1Q6PJG2 1045 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 USP49Q70CQ1 688 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 ZBTB33Q86T24 672 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 ACAP3Q96P50 834 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 MRPL17Q9NRX2 175 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 FAM13BQ9NYF5 915 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 ANKFY1Q9P2R3 1169 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 SEL1LQ9UBV2 794 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 CD207Q9UJ71 328 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 USP20Q9Y2K6 914 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 MYH11P35749 1972 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 SPDYE4A6NLX3 237 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 TADA2AO75478 443 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 MAPTP10636 758 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 HARSP12081 509 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 GAP43P17677 238 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 GTF2F1P35269 517 aaKnown RBP eCLIP17.27■□□□□ 0.366e-7■■■■■ 38.6
TSPAN4-201ENST00000346501 ZNF131P52739 623 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 NCKAP1LP55160 1127 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 NOLC1Q14978 699 aaKnown RBP eCLIP17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 DYMQ7RTS9 669 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 PPFIBP1Q86W92 1011 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 PDILTQ8N807 584 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 CASP10Q92851 521 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 PYM1Q9BRP8 204 aaKnown RBP17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 PANK2Q9BZ23 570 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 ZBP1Q9H171 429 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 CDT1Q9H211 546 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 CUEDC2Q9H467 287 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 SLC38A7Q9NVC3 462 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 MIOSQ9NXC5 875 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 PCDHGC5Q9Y5F6 944 aa17.27■□□□□ 0.36
TSPAN4-201ENST00000346501 CUL9Q8IWT3 2517 aa17.26■□□□□ 0.35
TSPAN4-201ENST00000346501 C2orf71A6NGG8 1288 aa17.26■□□□□ 0.35
TSPAN4-201ENST00000346501 HNRNPDLO14979 420 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-201ENST00000346501 SOD2P04179 222 aa17.26■□□□□ 0.35
TSPAN4-201ENST00000346501 IDEP14735 1019 aa17.26■□□□□ 0.35
TSPAN4-201ENST00000346501 IQUBQ8NA54 791 aa17.26■□□□□ 0.35
TSPAN4-201ENST00000346501 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-201ENST00000346501 DDX12PQ92771 950 aa17.26■□□□□ 0.35
TSPAN4-201ENST00000346501 TBX20Q9UMR3 447 aa17.26■□□□□ 0.35
TSPAN4-201ENST00000346501 IRAK3Q9Y616 596 aa17.26■□□□□ 0.35
TSPAN4-201ENST00000346501 BRWD1Q9NSI6 2320 aa17.26■□□□□ 0.35
TSPAN4-201ENST00000346501 GRXCR2A6NFK2 248 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 HIDE1A8MVS5 230 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 TNFRSF10AO00220 468 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 LINC01565O15544 149 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 EDN1P05305 212 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 HOXB8P17481 243 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 OSTNP61366 133 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 KRT85P78386 507 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 ELAVL2Q12926 359 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 SMAD4Q13485 552 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 HSP90AA2PQ14568 343 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 CLUL1Q15846 466 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 TPRNQ4KMQ1 711 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 TAS1R3Q7RTX0 852 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 TMEM173Q86WV6 379 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 UROC1Q96N76 676 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 POP1Q99575 1024 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 PTPRHQ9HD43 1115 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 DPP7Q9UHL4 492 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 ADAM28Q9UKQ2 775 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 EXOC7Q9UPT5 735 aa17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 TDRD15B5MCY1 1934 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-201ENST00000346501 SF3B1O75533 1304 aaKnown RBP eCLIP17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 TBX10O75333 385 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 BRD1O95696 1058 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 KLRC2P26717 231 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 LTBRP36941 435 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 GLUD2P49448 558 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 CREMQ03060 361 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 USP41Q3LFD5 358 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 LLGL2Q6P1M3 1020 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 STXBP4Q6ZWJ1 553 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 CCDC65Q8IXS2 484 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 GSTCDQ8NEC7 633 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 KCNN1Q92952 543 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 HVCN1Q96D96 273 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 HERC2P3Q9BVR0 1158 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 MRPL44Q9H9J2 332 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 PRKAG3Q9UGI9 489 aa17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 BARX2Q9UMQ3 279 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-201ENST00000346501 UNC80Q8N2C7 3258 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 CASTOR2A6NHX0 329 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 TRAPPC3O43617 180 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 B4GALT3O60512 393 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 ADH1AP07327 375 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 PROZP22891 400 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 SSTR3P32745 418 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 DNM1Q05193 864 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 MCL1Q07820 350 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 COASYQ13057 564 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 ALCAMQ13740 583 aa17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 HERC4Q5GLZ8 1057 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-201ENST00000346501 SLFN12LQ6IEE8 588 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms