RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.44■□□□□ 0.227e-10■□□□□ 9.1
SRPK1-201ENST00000346162 JMJD4Q9H9V9 463 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 PIM2Q9P1W9 311 aa16.44■□□□□ 0.22
SRPK1-201ENST00000346162 DENND3A2RUS2 1198 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 INHBAP08476 426 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 GHRP10912 638 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 NMT1P30419 496 aaKnown RBP16.43■□□□□ 0.22
SRPK1-201ENST00000346162 RNF169Q8NCN4 708 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 MAD2L2Q9UI95 211 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 ANAPC7Q9UJX3 599 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 ESYT2A0FGR8 921 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 DDX42Q86XP3 938 aaKnown RBP eCLIP16.43■□□□□ 0.22
SRPK1-201ENST00000346162 NSUN6Q8TEA1 469 aaKnown RBP16.43■□□□□ 0.22
SRPK1-201ENST00000346162 EZH1Q92800 747 aaPredicted RBP16.43■□□□□ 0.22
SRPK1-201ENST00000346162 KAT2BQ92831 832 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 HAUS8Q9BT25 410 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 CORO1CQ9ULV4 474 aaPredicted RBP16.43■□□□□ 0.22
SRPK1-201ENST00000346162 ZHX2Q9Y6X8 837 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 SYNGAP1Q96PV0 1343 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 MST1RQ04912 1400 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 TCRBV5S4A2TA0A5A2 114 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 NXNQ6DKJ4 435 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 SNRNP48Q6IEG0 339 aaKnown RBP16.43■□□□□ 0.22
SRPK1-201ENST00000346162 DPP9Q86TI2 863 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 MED10Q9BTT4 135 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 INTS2Q9H0H0 1204 aaKnown RBP16.43■□□□□ 0.22
SRPK1-201ENST00000346162 MAD1L1Q9Y6D9 718 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 NWD1Q149M9 1564 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 TLR3O15455 904 aaKnown RBP16.43■□□□□ 0.22
SRPK1-201ENST00000346162 MT-ND3P03897 115 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 MCF2P10911 925 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 ARFIP2P53365 341 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 OCA2Q04671 838 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 FAM47CQ5HY64 1035 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 CCDC80Q76M96 950 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 APOL6Q9BWW8 343 aa16.43■□□□□ 0.22
SRPK1-201ENST00000346162 UTP6Q9NYH9 597 aaKnown RBP16.43■□□□□ 0.22
SRPK1-201ENST00000346162 SSU72P8A0A1W2PR75 194 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 LDHAP00338 332 aaKnown RBP16.42■□□□□ 0.22
SRPK1-201ENST00000346162 HSD17B3P37058 310 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 RPS6KA3P51812 740 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 DYNLT1P63172 113 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 ITIH4Q14624 930 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 RINT1Q6NUQ1 792 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 ADGRA1Q86SQ6 560 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 LZICQ8WZA0 190 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 ADAM22Q9P0K1 906 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 RFC5P40937 340 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 BTKQ06187 659 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 PPP2R5CQ13362 524 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 ZNF746Q6NUN9 644 aaPredicted RBP16.42■□□□□ 0.22
SRPK1-201ENST00000346162 MSL3Q8N5Y2 521 aaKnown RBP16.42■□□□□ 0.22
SRPK1-201ENST00000346162 CASP10Q92851 521 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 NMD3Q96D46 503 aaKnown RBP16.42■□□□□ 0.22
SRPK1-201ENST00000346162 WRNIP1Q96S55 665 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 CCDC22O60826 627 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 CHRNA5P30532 468 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 SFNP31947 248 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 SKOR1P84550 965 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 EZH2Q15910 746 aaKnown RBP16.42■□□□□ 0.22
SRPK1-201ENST00000346162 CALN1Q9BXU9 219 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 KIAA1586Q9HCI6 787 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 ZBBXA8MT70 800 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 RAD51CO43502 376 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 TXNRD3Q86VQ6 643 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 FAM149B1Q96BN6 582 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 NLRP4Q96MN2 994 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 FAM213AQ9BRX8 229 aa16.42■□□□□ 0.22
SRPK1-201ENST00000346162 PALM3A6NDB9 673 aaPredicted RBP16.41■□□□□ 0.22
SRPK1-201ENST00000346162 FAM187AA6NFU0 413 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 A6NJR5 290 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 TBX3O15119 743 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 FTLP02792 175 aaPredicted RBP16.41■□□□□ 0.22
SRPK1-201ENST00000346162 PSMC5P62195 406 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 RCN1Q15293 331 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 SURF1Q15526 300 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 SLC18A3Q16572 532 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 SCARA5Q6ZMJ2 495 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 NANOGNBQ7Z5D8 188 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 AGAP11Q8TF27 550 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 TUFT1Q9NNX1 390 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 NOC2LQ9Y3T9 749 aaKnown RBP16.41■□□□□ 0.22
SRPK1-201ENST00000346162 CD44P16070 742 aaKnown RBP16.41■□□□□ 0.22
SRPK1-201ENST00000346162 ZNF211Q13398 564 aaPredicted RBP16.41■□□□□ 0.22
SRPK1-201ENST00000346162 STXBP2Q15833 593 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 HAUS6Q7Z4H7 955 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 THNSL1Q8IYQ7 743 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 CCDC138Q96M89 665 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 SPC25Q9HBM1 224 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 GABBR1Q9UBS5 961 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 DCCP43146 1447 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 MED7O43513 233 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 MDM2Q00987 491 aaPredicted RBP16.41■□□□□ 0.22
SRPK1-201ENST00000346162 DAGLBQ8NCG7 672 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 REEP2Q9BRK0 252 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 DBR1Q9UK59 544 aaKnown RBP16.41■□□□□ 0.22
SRPK1-201ENST00000346162 EMSYQ7Z589 1322 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 CLDN3O15551 220 aa16.41■□□□□ 0.22
SRPK1-201ENST00000346162 FXR2P51116 673 aaKnown RBP eCLIP16.41■□□□□ 0.228e-6■□□□□ 10.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms