RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 DSG1Q02413 1049 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 TNFAIP1Q13829 316 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 SCARF1Q14162 830 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 ZCWPW2Q504Y3 356 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 LVRNQ6Q4G3 990 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 EXT2Q93063 718 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 DDX28Q9NUL7 540 aaKnown RBP18.47■□□□□ 0.55
SPAST-202ENST00000345662 PKD2L2Q9NZM6 624 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 APEX2Q9UBZ4 518 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 PCSK1NQ9UHG2 260 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 UBE4BO95155 1302 aa18.47■□□□□ 0.55
SPAST-202ENST00000345662 PALM3A6NDB9 673 aaPredicted RBP18.46■□□□□ 0.55
SPAST-202ENST00000345662 ADCY3O60266 1144 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 DAB1O75553 588 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 ESRRBO95718 433 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 PSAPP07602 524 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 AARSP49588 968 aaKnown RBP eCLIP18.46■□□□□ 0.55
SPAST-202ENST00000345662 ZNF667Q5HYK9 610 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 ZBTB41Q5SVQ8 909 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 FOXR1Q6PIV2 292 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 KCNB2Q92953 911 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 DNAJC3Q13217 504 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 CNPY4Q8N129 248 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 ZNF446Q9NWS9 450 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 TSC22D4Q9Y3Q8 395 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 CAPN6Q9Y6Q1 641 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 ABCA8O94911 1581 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 ROBO2Q9HCK4 1378 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 SEC24DO94855 1032 aaPredicted RBP18.46■□□□□ 0.55
SPAST-202ENST00000345662 MAGEA4P43358 317 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 EXOC8Q8IYI6 725 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 APOL6Q9BWW8 343 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 OSBPL8Q9BZF1 889 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 DCLRE1BQ9H816 532 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 PARVAQ9NVD7 372 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 PIK3R2O00459 728 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 RABL6Q3YEC7 729 aaPredicted RBP18.46■□□□□ 0.55
SPAST-202ENST00000345662 SH3RF3Q8TEJ3 882 aaPredicted RBP18.46■□□□□ 0.55
SPAST-202ENST00000345662 HPSEQ9Y251 543 aa18.46■□□□□ 0.55
SPAST-202ENST00000345662 PPIP5K2O43314 1243 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 GRIN1Q05586 938 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 PTPAQ15257 358 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 CARD9Q9H257 536 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 CYP26A1O43174 497 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 OSTNP61366 133 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 IGBP1P78318 339 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 MRPS15P82914 257 aaKnown RBP18.45■□□□□ 0.54
SPAST-202ENST00000345662 MARCOQ9UEW3 520 aaPredicted RBP18.45■□□□□ 0.54
SPAST-202ENST00000345662 DDX20Q9UHI6 824 aaKnown RBP18.45■□□□□ 0.54
SPAST-202ENST00000345662 DUSP10Q9Y6W6 482 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 PLEKP08567 350 aaPredicted RBP18.45■□□□□ 0.54
SPAST-202ENST00000345662 BCAR1P56945 870 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 EDRF1Q3B7T1 1238 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 DCAF4Q8WV16 495 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 IL1RAPL1Q9NZN1 696 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 SLC16A4O15374 487 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 RCSD1Q6JBY9 416 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 ATG9AQ7Z3C6 839 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 CMTM5Q96DZ9 223 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 CCT7Q99832 543 aa18.45■□□□□ 0.54
SPAST-202ENST00000345662 SERPINB2P05120 415 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 STAT3P40763 770 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 ITGA8P53708 1063 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 SNRNP27Q8WVK2 155 aaKnown RBP18.44■□□□□ 0.54
SPAST-202ENST00000345662 FAM213AQ9BRX8 229 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 MANSC1Q9H8J5 431 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 PI4KBQ9UBF8 816 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 CCND2P30279 289 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 PRAMEP78395 509 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 EZH2Q15910 746 aaKnown RBP18.44■□□□□ 0.54
SPAST-202ENST00000345662 HEATR6Q6AI08 1181 aaKnown RBP18.44■□□□□ 0.54
SPAST-202ENST00000345662 RCOR2Q8IZ40 523 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 GOLPH3Q9H4A6 298 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 HAO1Q9UJM8 370 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 ALG6Q9Y672 507 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 FOXO4P98177 505 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 C4orf50Q6ZRC1 276 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 SIX6OS1Q8N1H7 587 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 MYMKA6NI61 221 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 MAP2K7O14733 419 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 OSBPP22059 807 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 PAX7P23759 505 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 PMLP29590 882 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 HERVK_113P62684 666 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 CDK17Q00537 523 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 TAP1Q03518 808 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 CDKL3Q8IVW4 592 aaPredicted RBP18.44■□□□□ 0.54
SPAST-202ENST00000345662 RPF1Q9H9Y2 349 aaKnown RBP18.44■□□□□ 0.54
SPAST-202ENST00000345662 PHTF1Q9UMS5 762 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 ANKARQ7Z5J8 1434 aa18.44■□□□□ 0.54
SPAST-202ENST00000345662 EFCAB6Q5THR3 1501 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 FSBPO95073 299 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 C16orf89Q6UX73 402 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 MCPH1Q8NEM0 835 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 SPDYE1Q8NFV5 336 aaPredicted RBP18.43■□□□□ 0.54
SPAST-202ENST00000345662 AURKCQ9UQB9 309 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 ZHX2Q9Y6X8 837 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 UBOX5O94941 541 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 SLC9A1P19634 815 aa18.43■□□□□ 0.54
SPAST-202ENST00000345662 JAK3P52333 1124 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms