RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ELOA2Q8IYF1 753 aaPredicted RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 FAM81AQ8TBF8 368 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 PARD3BQ8TEW8 1205 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 HDAC7Q8WUI4 952 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 CYP26B1Q9NR63 512 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 C20orf96Q9NUD7 363 aaPredicted RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 CDK12Q9NYV4 1490 aaPredicted RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 S100A5P33763 92 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 TFAMQ00059 246 aaKnown RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 MRPL28Q13084 256 aaKnown RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 CC2D2BQ6DHV5 1058 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 SCARA5Q6ZMJ2 495 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 SIX6OS1Q8N1H7 587 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 FAM192AQ9GZU8 254 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 PPCSQ9HAB8 311 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 IQCA1LA6NCM1 817 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 EIF2B2P49770 351 aaKnown RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 CERKLQ49MI3 558 aaPredicted RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 EAPPQ56P03 285 aaPredicted RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 IYDQ6PHW0 289 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 ANKRD36BP1Q96IX9 119 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 KCND1Q9NSA2 647 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 HERC5Q9UII4 1024 aaKnown RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 AP4S1Q9Y587 144 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 NBPF26B4DH59 902 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 RTN2O75298 545 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 MAP3K7CLP57077 242 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 MTDHQ86UE4 582 aaKnown RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 NBPF15Q8N660 670 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 STK32AQ8WU08 396 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 SCG3Q8WXD2 468 aaKnown RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 NGRNQ9NPE2 291 aaKnown RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
COL12A1-202ENST00000345356 IP6K2Q9UHH9 426 aa12.78□□□□□ -0.36
COL12A1-202ENST00000345356 PLOD1Q02809 727 aaPredicted RBP12.77□□□□□ -0.36
COL12A1-202ENST00000345356 SLC34A1Q06495 639 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 CYFIP1Q7L576 1253 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 VPS39Q96JC1 886 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 KLHL4Q9C0H6 718 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 COPAP53621 1224 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 DEFA1P59665 94 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 DEFA3P59666 94 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 OASLQ15646 514 aaKnown RBP12.77□□□□□ -0.36
COL12A1-202ENST00000345356 TRIM60Q495X7 471 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 Q4G0T1 1027 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 KCTD21Q4G0X4 260 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 DGKHQ86XP1 1220 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 XXYLT1Q8NBI6 393 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 RPS6KC1Q96S38 1066 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 SH3GL1Q99961 368 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 BRD8Q9H0E9 1235 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 RMI1Q9H9A7 625 aa12.77□□□□□ -0.36
COL12A1-202ENST00000345356 ADGRL3Q9HAR2 1447 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 GTPBP10A4D1E9 387 aaKnown RBP12.77□□□□□ -0.37
COL12A1-202ENST00000345356 PIK3R2O00459 728 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 TRAPPC3O43617 180 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 NPR1P16066 1061 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 RFX1P22670 979 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 TTMPQ5BVD1 217 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 ZNF786Q8N393 782 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 GIMAP8Q8ND71 665 aaPredicted RBP12.77□□□□□ -0.37
COL12A1-202ENST00000345356 TRAPPC9Q96Q05 1148 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 ERGIC2Q96RQ1 377 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 PLAGL2Q9UPG8 496 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 SPDYE16A6NNV3 312 aaPredicted RBP12.77□□□□□ -0.37
COL12A1-202ENST00000345356 OPLAHO14841 1288 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 GNPATO15228 680 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 FAM153BP0C7A2 387 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 CD44P16070 742 aaKnown RBP12.77□□□□□ -0.37
COL12A1-202ENST00000345356 SMARCA1P28370 1054 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 GSTT1P30711 240 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 ROR1Q01973 937 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 MAPK7Q13164 816 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 PTK7Q13308 1070 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 FAM153CQ494X1 144 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 SPDYE2Q495Y8 402 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 ARID3BQ8IVW6 561 aaPredicted RBP12.77□□□□□ -0.37
COL12A1-202ENST00000345356 ZBTB18Q99592 522 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 ADPGKQ9BRR6 497 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 ANO3Q9BYT9 981 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 FAM153AQ9UHL3 310 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.37
COL12A1-202ENST00000345356 MLH3Q9UHC1 1453 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 DLGAP3O95886 979 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 IGKV5-2P06315 115 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 GTF2IP78347 998 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 C16orf72Q14CZ0 275 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 CCDC103Q8IW40 242 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 TMEM35BQ8NCS4 154 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 MRPL1Q9BYD6 325 aaKnown RBP12.77□□□□□ -0.37
COL12A1-202ENST00000345356 SHCBP1LQ9BZQ2 653 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 KIF17Q9P2E2 1029 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 PCSK1NQ9UHG2 260 aa12.77□□□□□ -0.37
COL12A1-202ENST00000345356 NLRP1Q9C000 1473 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 ZSCAN5CA6NGD5 496 aaPredicted RBP12.76□□□□□ -0.37
COL12A1-202ENST00000345356 ERVV-2B6SEH9 535 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 CALB1P05937 261 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 VCAM1P19320 739 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 CALB2P22676 271 aa12.76□□□□□ -0.37
COL12A1-202ENST00000345356 VAMP7P51809 220 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms