RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 TAS1R2Q8TE23 839 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 CGRRF1Q99675 332 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 JRKLQ9Y4A0 524 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 DUSP10Q9Y6W6 482 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 FOXN3O00409 490 aaPredicted RBP27.27■■□□□ 1.96
TRADD-201ENST00000345057 CA12O43570 354 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 ALDH1A1P00352 501 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 EDN1P05305 212 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 TUBB4BP68371 445 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 CRHR2Q13324 411 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 GRIK4Q16099 956 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 IFI16Q16666 785 aaKnown RBP27.27■■□□□ 1.96
TRADD-201ENST00000345057 FAM187BQ17R55 369 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 WHAMMP3Q1A5X7 153 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 ZACNQ401N2 412 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 MPZL3Q6UWV2 235 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 BRSK2Q8IWQ3 736 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 TOPORSQ9NS56 1045 aaPredicted RBP27.27■■□□□ 1.96
TRADD-201ENST00000345057 AKT3Q9Y243 479 aa27.27■■□□□ 1.96
TRADD-201ENST00000345057 TMEM88BA6NKF7 163 aa27.26■■□□□ 1.95
TRADD-201ENST00000345057 EFCAB8A8MWE9 144 aa27.26■■□□□ 1.95
TRADD-201ENST00000345057 DYNC1LI2O43237 492 aaPredicted RBP27.26■■□□□ 1.95
TRADD-201ENST00000345057 ZNF865P0CJ78 1059 aaPredicted RBP27.26■■□□□ 1.95
TRADD-201ENST00000345057 CDC42EP1Q00587 391 aa27.26■■□□□ 1.95
TRADD-201ENST00000345057 GCNT1Q02742 428 aa27.26■■□□□ 1.95
TRADD-201ENST00000345057 TMEM132AQ24JP5 1023 aa27.26■■□□□ 1.95
TRADD-201ENST00000345057 WDR44Q5JSH3 913 aa27.26■■□□□ 1.95
TRADD-201ENST00000345057 ATF7IP2Q5U623 682 aa27.26■■□□□ 1.95
TRADD-201ENST00000345057 SEMA4DQ92854 862 aa27.26■■□□□ 1.95
TRADD-201ENST00000345057 CARD6Q9BX69 1037 aa27.26■■□□□ 1.95
TRADD-201ENST00000345057 ZEB2O60315 1214 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 LRRN2O75325 713 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 CPT1AP50416 773 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 MBTD1Q05BQ5 628 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 PAPD7Q5XG87 772 aaKnown RBP27.25■■□□□ 1.95
TRADD-201ENST00000345057 PDE11AQ9HCR9 933 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 C1orf112Q9NSG2 853 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 GJD2Q9UKL4 321 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 NENFQ9UMX5 172 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 ZSWIM8A7E2V4 1837 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 PNMA6AP0CW24 399 aaPredicted RBP27.25■■□□□ 1.95
TRADD-201ENST00000345057 CYP2B6P20813 491 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 PROZP22891 400 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 TLK2Q86UE8 772 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 SHC3Q92529 594 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 FLRT1Q9NZU1 646 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 TNFSF13BQ9Y275 285 aa27.25■■□□□ 1.95
TRADD-201ENST00000345057 C4BPAP04003 597 aaKnown RBP27.24■■□□□ 1.95
TRADD-201ENST00000345057 TNFAIP3P21580 790 aa27.24■■□□□ 1.95
TRADD-201ENST00000345057 BIRC3Q13489 604 aa27.24■■□□□ 1.95
TRADD-201ENST00000345057 FAM71AQ8IYT1 594 aa27.24■■□□□ 1.95
TRADD-201ENST00000345057 HELQQ8TDG4 1101 aa27.24■■□□□ 1.95
TRADD-201ENST00000345057 SAR1BQ9Y6B6 198 aa27.24■■□□□ 1.95
TRADD-201ENST00000345057 F2P00734 622 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 H2AFZP0C0S5 128 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 HARSP12081 509 aaKnown RBP27.23■■□□□ 1.95
TRADD-201ENST00000345057 NAP1L1P55209 391 aaKnown RBP27.23■■□□□ 1.95
TRADD-201ENST00000345057 AMPD2Q01433 879 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 H2AFVQ71UI9 128 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 ZNF410Q86VK4 478 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 WDR49Q8IV35 697 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 SLC30A5Q8TAD4 765 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 SYT11Q9BT88 431 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 AP5M1Q9H0R1 490 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 PTPRHQ9HD43 1115 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 TSKSQ9UJT2 592 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 CNTNAP2Q9UHC6 1331 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 DDX3XO00571 662 aaKnown RBP eCLIP27.23■■□□□ 1.952e-7■■■■■ 33.6
TRADD-201ENST00000345057 ADCY6O43306 1168 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 MOCS3O95396 460 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 CYP2C19P33261 490 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 PIK3CAP42336 1068 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 C1QTNF8P60827 252 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 ZNF568Q3ZCX4 644 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 PRAMEF19Q5SWL8 479 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 TRAPPC11Q7Z392 1133 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 ZBTB33Q86T24 672 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 UBXN4Q92575 508 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 ZNF516Q92618 1163 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 IFT122Q9HBG6 1241 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 NRCAMQ92823 1304 aa27.23■■□□□ 1.95
TRADD-201ENST00000345057 FAM189A1O60320 539 aa27.22■■□□□ 1.95
TRADD-201ENST00000345057 GJB1P08034 283 aa27.22■■□□□ 1.95
TRADD-201ENST00000345057 FCGRTP55899 365 aa27.22■■□□□ 1.95
TRADD-201ENST00000345057 POU5F1Q01860 360 aaKnown RBP27.22■■□□□ 1.95
TRADD-201ENST00000345057 NCBP1Q09161 790 aaKnown RBP27.22■■□□□ 1.95
TRADD-201ENST00000345057 AGPAT1Q99943 283 aa27.22■■□□□ 1.95
TRADD-201ENST00000345057 CPSF3Q9UKF6 684 aaKnown RBP27.22■■□□□ 1.95
TRADD-201ENST00000345057 CAPN6Q9Y6Q1 641 aa27.22■■□□□ 1.95
TRADD-201ENST00000345057 A0A0A6YYK5 440 aaPredicted RBP27.21■■□□□ 1.95
TRADD-201ENST00000345057 ABLIM1O14639 778 aa27.21■■□□□ 1.95
TRADD-201ENST00000345057 KYAT1Q16773 422 aa27.21■■□□□ 1.95
TRADD-201ENST00000345057 SRGAP1Q7Z6B7 1085 aa27.21■■□□□ 1.95
TRADD-201ENST00000345057 U2AF1L4Q8WU68 220 aaKnown RBP27.21■■□□□ 1.95
TRADD-201ENST00000345057 KREMEN1Q96MU8 473 aa27.21■■□□□ 1.95
TRADD-201ENST00000345057 TTLL13PA6NNM8 815 aa27.21■■□□□ 1.95
TRADD-201ENST00000345057 TADA3O75528 432 aa27.21■■□□□ 1.95
TRADD-201ENST00000345057 ECM2O94769 699 aaPredicted RBP27.21■■□□□ 1.95
TRADD-201ENST00000345057 IGHA2P01877 340 aa27.21■■□□□ 1.95
TRADD-201ENST00000345057 HLA-DRAP01903 254 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms