RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 LLGL2Q6P1M3 1020 aa22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 SNX21Q969T3 373 aa22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 RIPOR3Q96MK2 946 aa22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 KLHL5Q96PQ7 755 aa22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 ACO2Q99798 780 aaKnown RBP22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 KIFC3Q9BVG8 833 aa22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 CCSER1Q9C0I3 900 aa22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 ZSCAN16Q9H4T2 348 aaPredicted RBP22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 PTPRHQ9HD43 1115 aa22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 TOPORSQ9NS56 1045 aaPredicted RBP22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 SNTG2Q9NY99 539 aa22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 ADAM28Q9UKQ2 775 aa22.02■■□□□ 1.12
CEACAM3-201ENST00000344550 TDRD15B5MCY1 1934 aaKnown RBP22.02■■□□□ 1.11
CEACAM3-201ENST00000344550 ADH1AP07327 375 aa22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 CNPP09543 421 aaKnown RBP22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 KLRC2P26717 231 aa22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 GLUD2P49448 558 aa22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 ELAVL2Q12926 359 aaKnown RBP22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 ZRSR1Q15695 479 aaKnown RBP22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 USP41Q3LFD5 358 aa22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 KIAA1841Q6NSI8 718 aa22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 CYP26C1Q6V0L0 522 aa22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 HDAC7Q8WUI4 952 aa22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 KHSRPQ92945 711 aaKnown RBP eCLIP22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 RHOBTB2Q9BYZ6 727 aa22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 KLK14Q9P0G3 267 aa22.01■■□□□ 1.11
CEACAM3-201ENST00000344550 PTGESO14684 152 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 MCF2P10911 925 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 LIG1P18858 919 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 PROZP22891 400 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 GRM5P41594 1212 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 CLCN4P51793 760 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 STRN3Q13033 797 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 HSP90AA2PQ14568 343 aaPredicted RBP22■■□□□ 1.11
CEACAM3-201ENST00000344550 EEF1DP3Q658K8 133 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 FUT10Q6P4F1 479 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 ZPBP2Q6X784 338 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 RNF135Q8IUD6 432 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 AUTS2Q8WXX7 1259 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 UROC1Q96N76 676 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 CCDC94Q9BW85 323 aaPredicted RBP22■■□□□ 1.11
CEACAM3-201ENST00000344550 SFXN1Q9H9B4 322 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 FNIP2Q9P278 1114 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 NR2E1Q9Y466 385 aa22■■□□□ 1.11
CEACAM3-201ENST00000344550 ARIH1Q9Y4X5 557 aaPredicted RBP22■■□□□ 1.11
CEACAM3-201ENST00000344550 GTF3C5Q9Y5Q8 519 aaPredicted RBP22■■□□□ 1.11
CEACAM3-201ENST00000344550 SF3B1O75533 1304 aaKnown RBP eCLIP22■■□□□ 1.11
CEACAM3-201ENST00000344550 PRR33A8MZF0 331 aa21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 TADA2AO75478 443 aa21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 EDN1P05305 212 aa21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 SSBP05455 408 aaKnown RBP eCLIP21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 YARSP54577 528 aaKnown RBP21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 XKR4Q5GH76 650 aa21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 ATAT1Q5SQI0 421 aa21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 PDXDC1Q6P996 788 aa21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 TMEM161BQ8NDZ6 487 aa21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 CMASQ8NFW8 434 aaPredicted RBP21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 FBXL18Q96ME1 805 aa21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 POLD4Q9HCU8 107 aa21.99■■□□□ 1.11
CEACAM3-201ENST00000344550 TMEM189-UBE2V1I3L0A0 370 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 TOM1L1O75674 476 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 PAPLNO95428 1278 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 RESTQ13127 1097 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 PTPAQ15257 358 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 NAB2Q15742 525 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 ZNF568Q3ZCX4 644 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 MPZL3Q6UWV2 235 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 C15orf39Q6ZRI6 1047 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 LRFN3Q9BTN0 628 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 SLC38A7Q9NVC3 462 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 USTQ9Y2C2 406 aa21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 SRPRBQ9Y5M8 271 aaKnown RBP21.98■■□□□ 1.11
CEACAM3-201ENST00000344550 C5orf42Q9H799 3197 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 SLC16A4O15374 487 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 MAPTP10636 758 aaKnown RBP21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 EPCAMP16422 314 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 ZNF131P52739 623 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 KYAT1Q16773 422 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 ARSHQ5FYA8 562 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 ALKAL1Q6UXT8 129 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 TAS1R3Q7RTX0 852 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 DDX27Q96GQ7 796 aaKnown RBP21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 PPP1R10Q96QC0 940 aaKnown RBP21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 TCHPQ9BT92 498 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 CDT1Q9H211 546 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 PLEKHA4Q9H4M7 779 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 GDAQ9Y2T3 454 aa21.97■■□□□ 1.11
CEACAM3-201ENST00000344550 TEX28O15482 410 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 DDIT3P35638 169 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 NCKAP1LP55160 1127 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 DCLRE1AQ6PJP8 1040 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 TAS1R1Q7RTX1 841 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 RASSF8Q8NHQ8 419 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 RAD54LQ92698 747 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 ACAP3Q96P50 834 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 PLIN2Q99541 437 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 TARS2Q9BW92 718 aaKnown RBP21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 GPR62Q9BZJ7 368 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 PARVGQ9HBI0 331 aa21.96■■□□□ 1.11
CEACAM3-201ENST00000344550 C11orf16Q9NQ32 467 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms