RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 OR52E8Q6IFG1 317 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 VSIG1Q86XK7 387 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 RBBP8NLQ8NC74 664 aaPredicted RBP10.34□□□□□ -0.75
HOXA1-201ENST00000343060 DENND1AQ8TEH3 1009 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 SLC20A1Q8WUM9 679 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 C10orf82Q8WW14 230 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 TRAPPC9Q96Q05 1148 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 KIAA1683Q9H0B3 1180 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 PSTPIP2Q9H939 334 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.34□□□□□ -0.75
HOXA1-201ENST00000343060 WDR35Q9P2L0 1181 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 LNPEPQ9UIQ6 1025 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 PTPN22Q9Y2R2 807 aa10.34□□□□□ -0.75
HOXA1-201ENST00000343060 FAM47DPA6NHR8 397 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 MAPK13O15264 365 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 PRPF4O43172 522 aaKnown RBP eCLIP10.33□□□□□ -0.76
HOXA1-201ENST00000343060 HNRNPCL1O60812 293 aaKnown RBP10.33□□□□□ -0.76
HOXA1-201ENST00000343060 SMIM24O75264 130 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 TBCAO75347 108 aaKnown RBP10.33□□□□□ -0.76
HOXA1-201ENST00000343060 TARSP26639 723 aaKnown RBP10.33□□□□□ -0.76
HOXA1-201ENST00000343060 BTDP43251 543 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 MYL7Q01449 175 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 STAT4Q14765 748 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 Q4G0T1 1027 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 PHLDB3Q6NSJ2 640 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 MAEAQ7L5Y9 396 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 SLC17A8Q8NDX2 589 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 MAML1Q92585 1016 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 LRRC37BQ96QE4 947 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 ANO3Q9BYT9 981 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 DCLRE1BQ9H816 532 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 UBN1Q9NPG3 1134 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 NAALADL1Q9UQQ1 740 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 COL14A1Q05707 1796 aaKnown RBP10.33□□□□□ -0.76
HOXA1-201ENST00000343060 FOXO6A8MYZ6 492 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 FOXN3O00409 490 aaPredicted RBP10.33□□□□□ -0.76
HOXA1-201ENST00000343060 CYP1A2P05177 515 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 CHRNB2P17787 502 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 RASSF2P50749 326 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 OCRLQ01968 901 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 ZNF804AQ7Z570 1209 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 LONP2Q86WA8 852 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 DHX37Q8IY37 1157 aaKnown RBP10.33□□□□□ -0.76
HOXA1-201ENST00000343060 LRRC47Q8N1G4 583 aaKnown RBP10.33□□□□□ -0.76
HOXA1-201ENST00000343060 ANKRD35Q8N283 1001 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 LENG9Q96B70 501 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 GPCPD1Q9NPB8 672 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 CYLDQ9NQC7 956 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 HAO1Q9UJM8 370 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 LRCH1Q9Y2L9 728 aa10.33□□□□□ -0.76
HOXA1-201ENST00000343060 TMEM110-MUSTN1A8MSY1 372 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 THAP12O43422 761 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 EDF1O60869 148 aaKnown RBP10.32□□□□□ -0.76
HOXA1-201ENST00000343060 GSTA2P09210 222 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 GZMAP12544 262 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 RHBDL3P58872 404 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 GABPAQ06546 454 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 NR1H3Q13133 447 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 AP3B2Q13367 1082 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 MESDQ14696 234 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 KYNUQ16719 465 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 GNPTABQ3T906 1256 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 TMEM154Q6P9G4 183 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 C15orf52Q6ZUT6 534 aaKnown RBP10.32□□□□□ -0.76
HOXA1-201ENST00000343060 SRRM1Q8IYB3 904 aaKnown RBP10.32□□□□□ -0.76
HOXA1-201ENST00000343060 SUPT20HQ8NEM7 779 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 FIZ1Q96SL8 496 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 POP1Q99575 1024 aaKnown RBP10.32□□□□□ -0.76
HOXA1-201ENST00000343060 POLR3CQ9BUI4 534 aaPredicted RBP10.32□□□□□ -0.76
HOXA1-201ENST00000343060 TRAIPQ9BWF2 469 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 DENND2DQ9H6A0 471 aaPredicted RBP10.32□□□□□ -0.76
HOXA1-201ENST00000343060 SAR1AQ9NR31 198 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 SEPT11Q9NVA2 429 aaKnown RBP10.32□□□□□ -0.76
HOXA1-201ENST00000343060 NEU2Q9Y3R4 380 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 C2CD2Q9Y426 696 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 MEIS1O00470 390 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 BCRP11274 1271 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 PTPN4P29074 926 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 EPHB2P29323 1055 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 VHLP40337 213 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 ITGA8P53708 1063 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 PDK4Q16654 411 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 SLC45A4Q5BKX6 768 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 GPATCH4Q5T3I0 446 aaKnown RBP10.32□□□□□ -0.76
HOXA1-201ENST00000343060 FAM47EQ6ZV65 393 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 TDRPQ86YL5 185 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 SLC9A9Q8IVB4 645 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 TTC8Q8TAM2 541 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 ZNF398Q8TD17 642 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 VCXQ9H320 206 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 BCAS3Q9H6U6 928 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 NMRK1Q9NWW6 199 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 STOML1Q9UBI4 398 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 ASIC3Q9UHC3 531 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 PHTF1Q9UMS5 762 aa10.32□□□□□ -0.76
HOXA1-201ENST00000343060 NVLO15381 856 aaKnown RBP10.31□□□□□ -0.76
HOXA1-201ENST00000343060 UPP2O95045 317 aa10.31□□□□□ -0.76
HOXA1-201ENST00000343060 PDHA1P08559 390 aa10.31□□□□□ -0.76
HOXA1-201ENST00000343060 RNASELQ05823 741 aaKnown RBP10.31□□□□□ -0.76
HOXA1-201ENST00000343060 SGO2Q562F6 1265 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms