RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 PALB2Q86YC2 1186 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 SCN4BQ8IWT1 228 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 KLHL23Q8NBE8 558 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 HINFPQ9BQA5 517 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 NAT10Q9H0A0 1025 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 IRF2BPLQ9H1B7 796 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 ELAC1Q9H777 363 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 KCNMB3Q9NPA1 279 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 SNTG2Q9NY99 539 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 EHD2Q9NZN4 543 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 PCDH10Q9P2E7 1040 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 AGO2Q9UKV8 859 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 SRPRBQ9Y5M8 271 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 KAT6AQ92794 2004 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 A0A0U1RQF3 1178 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 RFXAPO00287 272 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 KIAA0391O15091 583 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 MED24O75448 989 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 TOM1L1O75674 476 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 TPM3P06753 285 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 U2AF2P26368 475 aaKnown RBP eCLIP4.56□□□□□ -1.682e-11■□□□□ 9
BPTF-204ENST00000342579 MLH1P40692 756 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 AMPD2Q01433 879 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 TMEM132DQ14C87 1099 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 FILIP1LQ4L180 1135 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 GLRA4Q5JXX5 417 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 MPZL3Q6UWV2 235 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 NUDT18Q6ZVK8 323 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 TMCO2Q7Z6W1 182 aaPredicted RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 FAM228AQ86W67 206 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 SLC43A3Q8NBI5 491 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 SMG7Q92540 1137 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 RAD54LQ92698 747 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 ZBTB10Q96DT7 871 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 USP28Q96RU2 1077 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 WNT8AQ9H1J5 351 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 MTMR10Q9NXD2 777 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 KLF15Q9UIH9 416 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 CIZ1Q9ULV3 898 aaPredicted RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 MYH7P12883 1935 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 BICDL2A1A5D9 508 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 H3BQ06 376 aaPredicted RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 PRPF40AO75400 957 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 ATG7O95352 703 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 CTDNEP1O95476 244 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 CHRNA1P02708 482 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 C4orf46Q504U0 113 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 CT47A1Q5JQC4 288 aaPredicted RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 TJAP1Q5JTD0 557 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 FAM109BQ6ICB4 259 aaPredicted RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 PTCRAQ6ISU1 281 aaPredicted RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 ANO5Q75V66 913 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 SND1Q7KZF4 910 aaKnown RBP eCLIP4.56□□□□□ -1.68
BPTF-204ENST00000342579 HASPINQ8TF76 798 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 RNF25Q96BH1 459 aaPredicted RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 UROC1Q96N76 676 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 CLIC6Q96NY7 704 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 CDCA3Q99618 268 aaPredicted RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 C17orf80Q9BSJ5 609 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 TNMDQ9H2S6 317 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 PCIF1Q9H4Z3 704 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 CYP4F11Q9HBI6 524 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 CD207Q9UJ71 328 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 NR2E1Q9Y466 385 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 CLIC4Q9Y696 253 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 MYH4Q9Y623 1939 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 CDK5RAP2Q96SN8 1893 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 LINC01553A4QN01 128 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 PP2D1A8MPX8 630 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 NRDCO43847 1150 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 ZNF862O60290 1169 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 PPP6R2O75170 966 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 LYPLA2O95372 231 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 MCF2P10911 925 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 ALADP13716 330 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 MYOGP15173 224 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 MTIF2P46199 727 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 NPTX2P47972 431 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 EPHB3P54753 998 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 PLD1Q13393 1074 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 TUSC3Q13454 348 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 UGCGQ16739 394 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 RARS2Q5T160 578 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 NYAP1Q6ZVC0 841 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 SFR1Q86XK3 245 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 FAM114A1Q8IWE2 563 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 OR6B3Q8NGW1 331 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 ETNPPLQ8TBG4 499 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 DDX12PQ92771 950 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 MRPL38Q96DV4 380 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 NECTIN4Q96NY8 510 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 SYNCQ9H7C4 482 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 AGO3Q9H9G7 860 aaKnown RBP4.56□□□□□ -1.68
BPTF-204ENST00000342579 RGS18Q9NS28 235 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 DZANK1Q9NVP4 752 aa4.56□□□□□ -1.68
BPTF-204ENST00000342579 A0A1B0GVL5 298 aa4.55□□□□□ -1.68
BPTF-204ENST00000342579 CCDC189A1A4V9 331 aa4.55□□□□□ -1.68
BPTF-204ENST00000342579 MBLAC1A4D2B0 266 aaPredicted RBP4.55□□□□□ -1.68
BPTF-204ENST00000342579 OGTO15294 1046 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms