RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 HLA-DPA1P20036 260 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 ALX1Q15699 326 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 RNF103-CHMP3A0A140T963 221 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 MAP4P27816 1152 aaKnown RBP16.1■□□□□ 0.17
COL11A2-201ENST00000341947 TYK2P29597 1187 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 MTMR2Q13614 643 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 SLC13A1Q9BZW2 595 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 SYNDIG1Q9H7V2 258 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 SLC4A7Q9Y6M7 1214 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 CYP19A1P11511 503 aaPredicted RBP16.1■□□□□ 0.17
COL11A2-201ENST00000341947 SNX17Q15036 470 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 SEPT8Q92599 483 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 ARHGAP10A1A4S6 786 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 ZSCAN9O15535 394 aaPredicted RBP16.1■□□□□ 0.17
COL11A2-201ENST00000341947 ATP9BO43861 1147 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 TADA2AO75478 443 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 EYA4O95677 639 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 ARFIP2P53365 341 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 OSBPL9Q96SU4 736 aa16.1■□□□□ 0.17
COL11A2-201ENST00000341947 AP3B1O00203 1094 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 IGKV5-2P06315 115 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 KRT72Q14CN4 511 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 ZC3H18Q86VM9 953 aaKnown RBP16.09■□□□□ 0.17
COL11A2-201ENST00000341947 NOP53Q9NZM5 478 aaKnown RBP16.09■□□□□ 0.17
COL11A2-201ENST00000341947 KIF1BO60333 1816 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 SSTR3P32745 418 aaPredicted RBP16.09■□□□□ 0.17
COL11A2-201ENST00000341947 BEND6Q5SZJ8 279 aaPredicted RBP16.09■□□□□ 0.17
COL11A2-201ENST00000341947 FRMD5Q7Z6J6 570 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 GUF1Q8N442 669 aaKnown RBP16.09■□□□□ 0.17
COL11A2-201ENST00000341947 SRPK1Q96SB4 655 aaKnown RBP16.09■□□□□ 0.17
COL11A2-201ENST00000341947 TRIM49P0CI25 452 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 TRIM49CP0CI26 452 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 MAGOHP61326 146 aaKnown RBP16.09■□□□□ 0.17
COL11A2-201ENST00000341947 TKFCQ3LXA3 575 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 IZUMO3Q5VZ72 239 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 CCDC90BQ9GZT6 254 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 PSMD3O43242 534 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 GOLPH3LQ9H4A5 285 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 NCK2O43639 380 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 ORC4O43929 436 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 ARL4DP49703 201 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 CCDC137Q6PK04 289 aaKnown RBP16.09■□□□□ 0.17
COL11A2-201ENST00000341947 SELENONQ9NZV5 590 aa16.09■□□□□ 0.17
COL11A2-201ENST00000341947 SPDYE5A6NIY4 337 aa16.08■□□□□ 0.17
COL11A2-201ENST00000341947 SNAP23O00161 211 aa16.08■□□□□ 0.17
COL11A2-201ENST00000341947 AKR1B1P15121 316 aa16.08■□□□□ 0.17
COL11A2-201ENST00000341947 SMAD1Q15797 465 aaKnown RBP16.08■□□□□ 0.17
COL11A2-201ENST00000341947 SPDYE7PQ495Y7 208 aa16.08■□□□□ 0.17
COL11A2-201ENST00000341947 MEI1Q5TIA1 1274 aa16.08■□□□□ 0.17
COL11A2-201ENST00000341947 TGS1Q96RS0 853 aaKnown RBP16.08■□□□□ 0.17
COL11A2-201ENST00000341947 KCNA4P22459 653 aa16.08■□□□□ 0.17
COL11A2-201ENST00000341947 SEMA3FQ13275 785 aa16.08■□□□□ 0.17
COL11A2-201ENST00000341947 STILQ15468 1287 aa16.08■□□□□ 0.17
COL11A2-201ENST00000341947 SIRT2Q8IXJ6 389 aa16.08■□□□□ 0.17
COL11A2-201ENST00000341947 DCTN4Q9UJW0 460 aa16.08■□□□□ 0.17
COL11A2-201ENST00000341947 PDCLQ13371 301 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 TAF1CQ15572 869 aaPredicted RBP16.08■□□□□ 0.16
COL11A2-201ENST00000341947 NFRKBQ6P4R8 1299 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 SCFD1Q8WVM8 642 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 AGPAT1Q99943 283 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 LBHD1Q9BQE6 289 aaPredicted RBP16.08■□□□□ 0.16
COL11A2-201ENST00000341947 SHROOM2Q13796 1616 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 SLC1A1P43005 524 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 EIF3EP60228 445 aaKnown RBP16.08■□□□□ 0.16
COL11A2-201ENST00000341947 NEDD1Q8NHV4 660 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 RFFLQ8WZ73 363 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 FOPNLQ96NB1 174 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 STXBP3O00186 592 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 HIST1H2AGP0C0S8 130 aaPredicted RBP16.08■□□□□ 0.16
COL11A2-201ENST00000341947 HIST1H2ADP20671 130 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 CDC27P30260 824 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 HIST1H2AHQ96KK5 128 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 HIST1H2AJQ99878 128 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 H2AFJQ9BTM1 129 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 RUBCNLQ9H714 662 aa16.08■□□□□ 0.16
COL11A2-201ENST00000341947 PPP2R2AP63151 447 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 RBP5P82980 135 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 ABHD8Q96I13 439 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 YIPF2Q9BWQ6 316 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 SLC16A3O15427 465 aaKnown RBP16.07■□□□□ 0.16
COL11A2-201ENST00000341947 BRAFP15056 766 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 ARSEP51690 589 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 AP2B1P63010 937 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 COG2Q14746 738 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 STX19Q8N4C7 294 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.07■□□□□ 0.16
COL11A2-201ENST00000341947 MAD2L2Q9UI95 211 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 AGAP1Q9UPQ3 857 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 RTN2O75298 545 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 LRRC8EQ6NSJ5 796 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 MTHFD1LQ6UB35 978 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 MICALL2Q8IY33 904 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 C1orf54Q8WWF1 131 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 YY1AP1Q9H869 796 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 PP2D1A8MPX8 630 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 H0Y3Z8 333 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 HMOX2P30519 316 aa16.07■□□□□ 0.16
COL11A2-201ENST00000341947 PARK7Q99497 189 aaKnown RBP16.07■□□□□ 0.16
COL11A2-201ENST00000341947 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.07■□□□□ 0.16
COL11A2-201ENST00000341947 ACTR2P61160 394 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms