RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 AMACRQ9UHK6 382 aa10.95□□□□□ -0.66
RBFOX1-202ENST00000340209 NOC2LQ9Y3T9 749 aaKnown RBP10.95□□□□□ -0.66
RBFOX1-202ENST00000340209 UBE4BO95155 1302 aa10.95□□□□□ -0.66
RBFOX1-202ENST00000340209 THAP12O43422 761 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 WEE2P0C1S8 567 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 MUTP22033 750 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 SNX1Q13596 522 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 C1orf220Q5T0J3 134 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 EFCAB12Q6NXP0 572 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 TAS1R3Q7RTX0 852 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 ZBTB8OSQ8IWT0 167 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 NLRP7Q8WX94 980 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 SYN2Q92777 582 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 CPB2Q96IY4 423 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 ZNF646O15015 1829 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 SPDYE5A6NIY4 337 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 EDN1P05305 212 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 PRKCBP05771 671 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 TUBB2AQ13885 445 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 MAP9Q49MG5 647 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 BEND6Q5SZJ8 279 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 XRRA1Q6P2D8 792 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 ARMCX2Q7L311 632 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 TAB3Q8N5C8 712 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 PCYT2Q99447 389 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 TUBB2BQ9BVA1 445 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 TRIM7Q9C029 511 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 PTPRJQ12913 1337 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 A0A0G2JLL6 359 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 TMEM191BP0C7N4 346 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 CARSP49589 748 aaKnown RBP10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 BRDTQ58F21 947 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 PRRT2Q7Z6L0 340 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 ZC3H3Q8IXZ2 948 aaKnown RBP10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 DNERQ8NFT8 737 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 PCDHB18PQ96TA0 734 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 NUP85Q9BW27 656 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 COL11A1P12107 1806 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 JAM2P57087 298 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 MAPK6Q16659 721 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 ODF2Q5BJF6 829 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 METTL7BQ6UX53 244 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 RNF10Q8N5U6 811 aaKnown RBP10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 LMBR1Q8WVP7 490 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 RNPEPQ9H4A4 650 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 TMEM8AQ9HCN3 771 aa10.94□□□□□ -0.66
RBFOX1-202ENST00000340209 GLI1P08151 1106 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 RAP1GAPP47736 663 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 LAMTOR4Q0VGL1 99 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 SF3A3Q12874 501 aaKnown RBP eCLIP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 TTLL4Q14679 1199 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 NOL9Q5SY16 702 aaKnown RBP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 FASTKD5Q7L8L6 764 aaKnown RBP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 SESTD1Q86VW0 696 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 CCDC25Q86WR0 208 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 TRIM51Q9BSJ1 452 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 CNOT8Q9UFF9 292 aaKnown RBP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 KIAA1217Q5T5P2 1943 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 MCM3APO60318 1980 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 MYH9P35579 1960 aaKnown RBP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 RAD51CO43502 376 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 LYPLA2O95372 231 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 TNNC1P63316 161 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 TRIP13Q15645 432 aaPredicted RBP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 GPRC5AQ8NFJ5 357 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 RFFLQ8WZ73 363 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 KRT35Q92764 455 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 ACSF2Q96CM8 615 aaPredicted RBP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 DNAJC17Q9NVM6 304 aaKnown RBP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 STIM2Q9P246 746 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 ANAPC7Q9UJX3 599 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 GOLGA8SH3BPF8 625 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 ZRANB2O95218 330 aaKnown RBP eCLIP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 HOXA7P31268 230 aaPredicted RBP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 FAM182AQ5T1J6 154 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 TDRD10Q5VZ19 366 aaKnown RBP10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 HEMGNQ9BXL5 484 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 GPR88Q9GZN0 384 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 ADAMTS5Q9UNA0 930 aa10.93□□□□□ -0.66
RBFOX1-202ENST00000340209 PHIPQ8WWQ0 1821 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 BTBD19C9JJ37 291 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 PGRMC1O00264 195 aaKnown RBP10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 PJA2O43164 708 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 CFHP08603 1231 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 CYP11B1P15538 503 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 PLCB4Q15147 1175 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 MEI1Q5TIA1 1274 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 EPS8L1Q8TE68 723 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 ACBD3Q9H3P7 528 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 COG5Q9UP83 839 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 PSME4Q14997 1843 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 GTPBP10A4D1E9 387 aaKnown RBP10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 DYNC1LI2O43237 492 aaPredicted RBP10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 EEF1DP3Q658K8 133 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 RDM1Q8NG50 284 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 ZNF564Q8TBZ8 553 aaPredicted RBP10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 ZNF516Q92618 1163 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 HAPLN2Q9GZV7 340 aa10.92□□□□□ -0.66
RBFOX1-202ENST00000340209 A0A087WZ62 844 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms