RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 STRN3Q13033 797 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 COASYQ13057 564 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 SMAD4Q13485 552 aaKnown RBP16.04■□□□□ 0.16
ERCC1-203ENST00000340192 KCNC3Q14003 757 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 GIT2Q14161 759 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 STK38Q15208 465 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 ZNF568Q3ZCX4 644 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 FAM178BQ8IXR5 827 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 LINC00301Q8NCQ3 95 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 ZNF396Q96N95 335 aaPredicted RBP16.04■□□□□ 0.16
ERCC1-203ENST00000340192 CDT1Q9H211 546 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 TFIP11Q9UBB9 837 aaKnown RBP16.04■□□□□ 0.16
ERCC1-203ENST00000340192 DAXXQ9UER7 740 aaPredicted RBP16.04■□□□□ 0.16
ERCC1-203ENST00000340192 IRAK3Q9Y616 596 aa16.04■□□□□ 0.16
ERCC1-203ENST00000340192 NCOR1O75376 2440 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 CITO14578 2027 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 PTGESO14684 152 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 MBTPS2O43462 519 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 FAM13AO94988 1023 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 F13A1P00488 732 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 SRGAP2BP0DMP2 458 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 PROZP22891 400 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 ZNF131P52739 623 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 PKP1Q13835 747 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 PTPN14Q15678 1187 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 SMAD2Q15796 467 aaKnown RBP16.03■□□□□ 0.16
ERCC1-203ENST00000340192 RRAGBQ5VZM2 374 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 TMEM184AQ6ZMB5 413 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 ZBTB33Q86T24 672 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 MYCT1Q8N699 235 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 CEP120Q8N960 986 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 SMRP1Q8NCR6 262 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 RABGGTAQ92696 567 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 TCHPQ9BT92 498 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 COLEC11Q9BWP8 271 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 PARVGQ9HBI0 331 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 CACNG4Q9UBN1 327 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 STK17AQ9UEE5 414 aa16.03■□□□□ 0.16
ERCC1-203ENST00000340192 H0YCG3 227 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 ABLIM1O14639 778 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 SPTLC2O15270 562 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 CLASP2O75122 1294 aaKnown RBP16.02■□□□□ 0.16
ERCC1-203ENST00000340192 TBCAO75347 108 aaKnown RBP16.02■□□□□ 0.16
ERCC1-203ENST00000340192 EFEMP2O95967 443 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 SOD2P04179 222 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 THP07101 528 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 MCF2P10911 925 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 GRM5P41594 1212 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 OSTNP61366 133 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 TUSC3Q13454 348 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 NAB2Q15742 525 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 FOXD4L6Q3SYB3 417 aaPredicted RBP16.02■□□□□ 0.16
ERCC1-203ENST00000340192 MPZL3Q6UWV2 235 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 FOXD4L3Q6VB84 417 aaPredicted RBP16.02■□□□□ 0.16
ERCC1-203ENST00000340192 TAS1R1Q7RTX1 841 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 HAUS6Q7Z4H7 955 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 TMEM87AQ8NBN3 555 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 ZBTB45Q96K62 511 aaPredicted RBP16.02■□□□□ 0.16
ERCC1-203ENST00000340192 ZHX3Q9H4I2 956 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 ANKFY1Q9P2R3 1169 aa16.02■□□□□ 0.16
ERCC1-203ENST00000340192 PDCD11Q14690 1871 aaKnown RBP16.01■□□□□ 0.15
ERCC1-203ENST00000340192 A0A087X0B3 334 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 CASTOR2A6NHX0 329 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 K7ENM7 598 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 TOM1L1O75674 476 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 HSP90AA2PQ14568 343 aaPredicted RBP16.01■□□□□ 0.15
ERCC1-203ENST00000340192 ANKRD54Q6NXT1 300 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 ZPBP2Q6X784 338 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 RNF168Q8IYW5 571 aaPredicted RBP16.01■□□□□ 0.15
ERCC1-203ENST00000340192 PAAF1Q9BRP4 392 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 HERC2P3Q9BVR0 1158 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 CCDC94Q9BW85 323 aaPredicted RBP16.01■□□□□ 0.15
ERCC1-203ENST00000340192 PANK2Q9BZ23 570 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 CD320Q9NPF0 282 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 MRPL17Q9NRX2 175 aaKnown RBP16.01■□□□□ 0.15
ERCC1-203ENST00000340192 ADAM28Q9UKQ2 775 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 HCFC2Q9Y5Z7 792 aa16.01■□□□□ 0.15
ERCC1-203ENST00000340192 PLXNA3P51805 1871 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 C2CD2LO14523 706 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 TRAK2O60296 914 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 LILRB3O75022 631 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 PPP6R2O75170 966 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 YEATS4O95619 227 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 BRD1O95696 1058 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 URODP06132 367 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 HARSP12081 509 aaKnown RBP16■□□□□ 0.15
ERCC1-203ENST00000340192 STAT6P42226 847 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 YARSP54577 528 aaKnown RBP16■□□□□ 0.15
ERCC1-203ENST00000340192 NOLC1Q14978 699 aaKnown RBP eCLIP16■□□□□ 0.15
ERCC1-203ENST00000340192 GLRA4Q5JXX5 417 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 CCDC73Q6ZRK6 1079 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 SV2BQ7L1I2 683 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 DYMQ7RTS9 669 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 CASP10Q92851 521 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 KCNN1Q92952 543 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 BICD1Q96G01 975 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 PPP1R10Q96QC0 940 aaKnown RBP16■□□□□ 0.15
ERCC1-203ENST00000340192 GPR62Q9BZJ7 368 aa16■□□□□ 0.15
ERCC1-203ENST00000340192 TOPORSQ9NS56 1045 aaPredicted RBP16■□□□□ 0.15
ERCC1-203ENST00000340192 PRKAG3Q9UGI9 489 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms