RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 NOP14P78316 857 aaKnown RBP12.75□□□□□ -0.37
USP1-201ENST00000339950 SLC27A3Q5K4L6 730 aa12.75□□□□□ -0.37
USP1-201ENST00000339950 TMC3Q7Z5M5 1100 aa12.75□□□□□ -0.37
USP1-201ENST00000339950 LRRC71Q8N4P6 559 aa12.75□□□□□ -0.37
USP1-201ENST00000339950 PRPF38AQ8NAV1 312 aaKnown RBP12.75□□□□□ -0.37
USP1-201ENST00000339950 HSPH1Q92598 858 aa12.75□□□□□ -0.37
USP1-201ENST00000339950 WRNIP1Q96S55 665 aa12.75□□□□□ -0.37
USP1-201ENST00000339950 RPAP3Q9H6T3 665 aaPredicted RBP12.75□□□□□ -0.37
USP1-201ENST00000339950 PITPNM2Q9BZ72 1349 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 TMEM120BA0PK00 339 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 CCDC160A6NGH7 325 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 BANF1O75531 89 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 UPP2O95045 317 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 RARAP10276 462 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 ETS1P14921 441 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 ASTE1Q2TB18 679 aaPredicted RBP12.74□□□□□ -0.37
USP1-201ENST00000339950 DACT2Q5SW24 774 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 KRT39Q6A163 491 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 C1orf186Q6ZWK4 172 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 PPP1R14CQ8TAE6 165 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 ZDHHC15Q96MV8 337 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 MSTO1Q9BUK6 570 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 SLC40A1Q9NP59 571 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 COL4A1P02462 1669 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 SPEF2Q9C093 1822 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 KAT6AQ92794 2004 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 DUOX1Q9NRD9 1551 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 A6NNZ2 444 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 ADRB2P07550 413 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 HNRNPH3P31942 346 aaKnown RBP12.74□□□□□ -0.37
USP1-201ENST00000339950 ITGA8P53708 1063 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 GPS1Q13098 491 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 TUBB8Q3ZCM7 444 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 MDH1BQ5I0G3 518 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 CASC4Q6P4E1 433 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 ZC3H18Q86VM9 953 aaKnown RBP12.74□□□□□ -0.37
USP1-201ENST00000339950 SESTD1Q86VW0 696 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 SIAH1Q8IUQ4 282 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 RHOT2Q8IXI1 618 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 CCDC89Q8N998 374 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 FBXL13Q8NEE6 735 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.74□□□□□ -0.37
USP1-201ENST00000339950 PCDHB18PQ96TA0 734 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 IQCGQ9H095 443 aaKnown RBP12.74□□□□□ -0.37
USP1-201ENST00000339950 TMEM206Q9H813 350 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 VCPKMTQ9H867 229 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 FAM107AO95990 144 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 TRAF1Q13077 416 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 DEFB132Q7Z7B7 95 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 MXRA8Q9BRK3 442 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 POLR3FQ9H1D9 316 aaPredicted RBP12.74□□□□□ -0.37
USP1-201ENST00000339950 TRAF3IP3Q9Y228 551 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 TTLL3Q9Y4R7 772 aa12.74□□□□□ -0.37
USP1-201ENST00000339950 CICQ96RK0 1608 aaPredicted RBP12.74□□□□□ -0.37
USP1-201ENST00000339950 O00370 1275 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 ASNSP08243 561 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 TMEM253P0C7T8 217 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 OVGP1Q12889 678 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 MAPK7Q13164 816 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 FAXCQ5TGI0 409 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 CAVIN3Q969G5 261 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 GINM1Q9NU53 330 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 SUCLA2Q9P2R7 463 aaPredicted RBP12.73□□□□□ -0.37
USP1-201ENST00000339950 TRIM33Q9UPN9 1127 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 GCLCP48506 637 aaPredicted RBP12.73□□□□□ -0.37
USP1-201ENST00000339950 YWHAGP61981 247 aaKnown RBP eCLIP12.73□□□□□ -0.37
USP1-201ENST00000339950 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 KDM7AQ6ZMT4 941 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 SV2AQ7L0J3 742 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 ZBED8Q8IZ13 594 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 C7orf31Q8N865 590 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 SEMA4DQ92854 862 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 FAM163AQ96GL9 167 aaPredicted RBP12.73□□□□□ -0.37
USP1-201ENST00000339950 C12orf65Q9H3J6 166 aaKnown RBP12.73□□□□□ -0.37
USP1-201ENST00000339950 RAB20Q9NX57 234 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 STK32BQ9NY57 414 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 TELO2Q9Y4R8 837 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 LACTBP83111 547 aaPredicted RBP12.73□□□□□ -0.37
USP1-201ENST00000339950 Q3C1V9 767 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 IZUMO3Q5VZ72 239 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 GADL1Q6ZQY3 521 aa12.73□□□□□ -0.37
USP1-201ENST00000339950 G3BP2Q9UN86 482 aaKnown RBP12.73□□□□□ -0.37
USP1-201ENST00000339950 ASTN2O75129 1339 aaPredicted RBP12.73□□□□□ -0.37
USP1-201ENST00000339950 MYH14Q7Z406 1995 aaKnown RBP12.72□□□□□ -0.37
USP1-201ENST00000339950 RPS6KA5O75582 802 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 KITP10721 976 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 NPTX2P47972 431 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 RARRES1P49788 294 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 PRCCQ92733 491 aaPredicted RBP12.72□□□□□ -0.37
USP1-201ENST00000339950 SLITRK6Q9H5Y7 841 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 COL20A1Q9P218 1284 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 KLHL14Q9P2G3 628 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 MAD1L1Q9Y6D9 718 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 C4AP0C0L4 1744 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 C4BP0C0L5 1744 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 A0A0G2JND7 137 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 ENO4A6NNW6 628 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 CYP11B1P15538 503 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 GRM1Q13255 1194 aa12.72□□□□□ -0.37
USP1-201ENST00000339950 ITGB3BPQ13352 177 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms