RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 ZNF394Q53GI3 561 aa12.39□□□□□ -0.43
ZNF648-201ENST00000339948 COBLL1Q53SF7 1204 aa12.39□□□□□ -0.43
ZNF648-201ENST00000339948 ARMC3Q5W041 872 aa12.39□□□□□ -0.43
ZNF648-201ENST00000339948 MIGA2Q7L4E1 593 aa12.39□□□□□ -0.43
ZNF648-201ENST00000339948 PIGWQ7Z7B1 504 aa12.39□□□□□ -0.43
ZNF648-201ENST00000339948 PAGR1Q9BTK6 254 aa12.39□□□□□ -0.43
ZNF648-201ENST00000339948 GGA2Q9UJY4 613 aa12.39□□□□□ -0.43
ZNF648-201ENST00000339948 COL4A1P02462 1669 aa12.39□□□□□ -0.43
ZNF648-201ENST00000339948 LRRD1A4D1F6 860 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 O00370 1275 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 C21orf2O43822 256 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 RALAP11233 206 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 ETS1P14921 441 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 CCND1P24385 295 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 SATB1Q01826 763 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 RRP1BQ14684 758 aaKnown RBP12.38□□□□□ -0.43
ZNF648-201ENST00000339948 PPP2R5EQ16537 467 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 NOP9Q86U38 636 aaKnown RBP12.38□□□□□ -0.43
ZNF648-201ENST00000339948 NAF1Q96HR8 494 aaKnown RBP12.38□□□□□ -0.43
ZNF648-201ENST00000339948 TSC22D3Q99576 134 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 POLLQ9UGP5 575 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 R3HDM2Q9Y2K5 976 aaKnown RBP12.38□□□□□ -0.43
ZNF648-201ENST00000339948 GH2P01242 217 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 MYCLP12524 364 aaPredicted RBP12.38□□□□□ -0.43
ZNF648-201ENST00000339948 PPP4CP60510 307 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 IRX4P78413 519 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 STRN3Q13033 797 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 TMEM154Q6P9G4 183 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 RBM15Q96T37 977 aaKnown RBP eCLIP12.38□□□□□ -0.43
ZNF648-201ENST00000339948 LXNQ9BS40 222 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 SLC12A4Q9UP95 1085 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 AFF2P51816 1311 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 P3H1Q32P28 736 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 ECHDC2Q86YB7 292 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 ZBED8Q8IZ13 594 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 HIPK4Q8NE63 616 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 NGLY1Q96IV0 654 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 KIAA1683Q9H0B3 1180 aa12.38□□□□□ -0.43
ZNF648-201ENST00000339948 MYH1P12882 1939 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 C2orf71A6NGG8 1288 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 MIF4GDA9UHW6 222 aaKnown RBP12.37□□□□□ -0.43
ZNF648-201ENST00000339948 EYA4O95677 639 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 PAEPP09466 180 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 NUDT17P0C025 328 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 PTGIRP43119 386 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 SLFN11Q7Z7L1 901 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 CBWD2Q8IUF1 395 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 C3orf20Q8ND61 904 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 RAB3IPQ96QF0 476 aaPredicted RBP12.37□□□□□ -0.43
ZNF648-201ENST00000339948 SMC6Q96SB8 1091 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 NARFQ9UHQ1 456 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 MYH3P11055 1940 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 MEIS2O14770 477 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 KITP10721 976 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 CETPP11597 493 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 PIK3CAP42336 1068 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 ATP13A4Q4VNC1 1196 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 DDX50Q9BQ39 737 aaKnown RBP12.37□□□□□ -0.43
ZNF648-201ENST00000339948 PHTF1Q9UMS5 762 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 PITPNM2Q9BZ72 1349 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 UBTFL6P0CB48 400 aaPredicted RBP12.37□□□□□ -0.43
ZNF648-201ENST00000339948 CHRNB2P17787 502 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 JAM2P57087 298 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 POU5F1Q01860 360 aaKnown RBP12.37□□□□□ -0.43
ZNF648-201ENST00000339948 TSNAXIP1Q2TAA8 658 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 VSTM1Q6UX27 236 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 STMN2Q93045 179 aa12.37□□□□□ -0.43
ZNF648-201ENST00000339948 PPP1R12AO14974 1030 aaPredicted RBP12.36□□□□□ -0.43
ZNF648-201ENST00000339948 FOXN2P32314 431 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 PADI6Q6TGC4 694 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 MIER3Q7Z3K6 550 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 CCHCR1Q8TD31 782 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 TTC17Q96AE7 1141 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 SNF8Q96H20 258 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 TRABDQ9H4I3 376 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 KCNMB3Q9NPA1 279 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 NINJ2Q9NZG7 142 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 MARCOQ9UEW3 520 aaPredicted RBP12.36□□□□□ -0.43
ZNF648-201ENST00000339948 ZFP69BQ9UJL9 534 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 SGK1O00141 431 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 CES2O00748 559 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 ZBED4O75132 1171 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 ZCCHC18P0CG32 403 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 ARP10275 920 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 GNAT1P11488 350 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 TNNI1P19237 187 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 RRM1P23921 792 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 SHMT1P34896 483 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 RFC5P40937 340 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 GPS1Q13098 491 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 RASA3Q14644 834 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 PKN2Q16513 984 aaKnown RBP12.36□□□□□ -0.43
ZNF648-201ENST00000339948 TAF1BQ53T94 588 aaPredicted RBP12.36□□□□□ -0.43
ZNF648-201ENST00000339948 MTDHQ86UE4 582 aaKnown RBP12.36□□□□□ -0.43
ZNF648-201ENST00000339948 ANKRD35Q8N283 1001 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 TXLNGQ9NUQ3 528 aa12.36□□□□□ -0.43
ZNF648-201ENST00000339948 A0A0A6YYK5 440 aaPredicted RBP12.36□□□□□ -0.43
ZNF648-201ENST00000339948 SPDYE5A6NIY4 337 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms