RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 APPL1Q9UKG1 709 aa13.34□□□□□ -0.27
BRPF3-201ENST00000339717 TTLL1O95922 423 aa13.34□□□□□ -0.27
BRPF3-201ENST00000339717 PDIA3P30101 505 aaKnown RBP13.34□□□□□ -0.27
BRPF3-201ENST00000339717 CCNFP41002 786 aa13.34□□□□□ -0.27
BRPF3-201ENST00000339717 HALP42357 657 aa13.34□□□□□ -0.27
BRPF3-201ENST00000339717 SNX32Q86XE0 403 aa13.34□□□□□ -0.27
BRPF3-201ENST00000339717 FAM9CQ8IZT9 166 aa13.34□□□□□ -0.27
BRPF3-201ENST00000339717 OR6Y1Q8NGX8 325 aa13.34□□□□□ -0.27
BRPF3-201ENST00000339717 APOL4Q9BPW4 351 aa13.34□□□□□ -0.27
BRPF3-201ENST00000339717 EDEM3Q9BZQ6 932 aa13.34□□□□□ -0.27
BRPF3-201ENST00000339717 WDR12Q9GZL7 423 aaKnown RBP13.34□□□□□ -0.27
BRPF3-201ENST00000339717 PRDM11Q9NQV5 511 aa13.34□□□□□ -0.27
BRPF3-201ENST00000339717 UVRAGQ9P2Y5 699 aa13.34□□□□□ -0.27
BRPF3-201ENST00000339717 PPP2R5CQ13362 524 aa13.33□□□□□ -0.27
BRPF3-201ENST00000339717 CCDC28AQ8IWP9 274 aa13.33□□□□□ -0.27
BRPF3-201ENST00000339717 GIMAP8Q8ND71 665 aaPredicted RBP13.33□□□□□ -0.27
BRPF3-201ENST00000339717 STK39Q9UEW8 545 aa13.33□□□□□ -0.27
BRPF3-201ENST00000339717 DBR1Q9UK59 544 aaKnown RBP13.33□□□□□ -0.27
BRPF3-201ENST00000339717 AGAP1Q9UPQ3 857 aa13.33□□□□□ -0.27
BRPF3-201ENST00000339717 COMMD10Q9Y6G5 202 aa13.33□□□□□ -0.27
BRPF3-201ENST00000339717 ITSN2Q9NZM3 1697 aa13.33□□□□□ -0.27
BRPF3-201ENST00000339717 IFNB1P01574 187 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 CALB1P05937 261 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 FYNP06241 537 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 PRKACAP17612 351 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 TCHHL1Q5QJ38 904 aaPredicted RBP13.33□□□□□ -0.28
BRPF3-201ENST00000339717 ANO7Q6IWH7 933 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 USP38Q8NB14 1042 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 CDKL2Q92772 493 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 VTI1AQ96AJ9 217 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 BTBD6Q96KE9 485 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 DDX50Q9BQ39 737 aaKnown RBP13.33□□□□□ -0.28
BRPF3-201ENST00000339717 OSBPL7Q9BZF2 842 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 NDST4Q9H3R1 872 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 JMJD4Q9H9V9 463 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 DBF4Q9UBU7 674 aaPredicted RBP13.33□□□□□ -0.28
BRPF3-201ENST00000339717 UMODL1Q5DID0 1318 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 SLC10A5Q5PT55 438 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 MKL1Q969V6 931 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 PLIN2Q99541 437 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 ACAT2Q9BWD1 397 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 SLC12A4Q9UP95 1085 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 DUOX2Q9NRD8 1548 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 SPAG6O75602 509 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 CHKAP35790 457 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 SLC9A3P48764 834 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 OCRLQ01968 901 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 PUDPQ08623 228 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 SNX17Q15036 470 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 BBS9Q3SYG4 887 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 FNIP1Q8TF40 1166 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 PGM2Q96G03 612 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 CITED4Q96RK1 184 aa13.33□□□□□ -0.28
BRPF3-201ENST00000339717 ADD3Q9UEY8 706 aaKnown RBP13.33□□□□□ -0.28
BRPF3-201ENST00000339717 TDRKHQ9Y2W6 561 aaKnown RBP13.33□□□□□ -0.28
BRPF3-201ENST00000339717 ADAMTS12P58397 1594 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ADCY9O60503 1353 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 M0QX08 132 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 FAM13AO94988 1023 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 CCNE1P24864 410 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ERFP50548 548 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 NCKAP1LP55160 1127 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 KCNA1Q09470 495 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 PABPC4Q13310 644 aaKnown RBP eCLIP13.32□□□□□ -0.288e-12■■■■■ 27.5
BRPF3-201ENST00000339717 IDI1Q13907 227 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 RNF207Q6ZRF8 634 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ALDH8A1Q9H2A2 487 aaPredicted RBP13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ADNPQ9H2P0 1102 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 TLR7Q9NYK1 1049 aaKnown RBP13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ASXL2Q76L83 1435 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 H3BNX3 289 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 TRIM24O15164 1050 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 SPTLC1O15269 473 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ASS1P00966 412 aaKnown RBP13.32□□□□□ -0.28
BRPF3-201ENST00000339717 CD97P48960 835 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
BRPF3-201ENST00000339717 LAMC2Q13753 1193 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ARMCX4Q5H9R4 360 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 SYMPKQ92797 1274 aaKnown RBP13.32□□□□□ -0.28
BRPF3-201ENST00000339717 PARVAQ9NVD7 372 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ETNK2Q9NVF9 386 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 RAB20Q9NX57 234 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 WBP11Q9Y2W2 641 aaKnown RBP13.32□□□□□ -0.28
BRPF3-201ENST00000339717 SQORQ9Y6N5 450 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 SLC4A4Q9Y6R1 1079 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 E7EWF7 191 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ZBED1O96006 694 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ZNF844Q08AG5 666 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 INPP5AQ14642 412 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 VPS4AQ9UN37 437 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 FARP2O94887 1054 aaPredicted RBP13.32□□□□□ -0.28
BRPF3-201ENST00000339717 CDC27P30260 824 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 SLC15A2Q16348 729 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 DGUOKQ16854 277 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
BRPF3-201ENST00000339717 GABPB2Q8TAK5 448 aaPredicted RBP13.32□□□□□ -0.28
BRPF3-201ENST00000339717 SPIRE2Q8WWL2 714 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 LRP2BPQ9P2M1 347 aa13.32□□□□□ -0.28
BRPF3-201ENST00000339717 PRAG1Q86YV5 1406 aa13.31□□□□□ -0.28
BRPF3-201ENST00000339717 KDM5BQ9UGL1 1544 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms