RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 NDE1Q9NXR1 346 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 ZNF212Q9UDV6 495 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 ADAMTS1Q9UHI8 967 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 APPL1Q9UKG1 709 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 PHTF1Q9UMS5 762 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 A0A087X0T9 212 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 C15orf38-AP3S2A0A0A6YYH1 394 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 MATN2O00339 956 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 MAPK13O15264 365 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 PRDM1O75626 825 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 TRMUO75648 421 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 FGGP02679 453 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 FAM228BP0C875 321 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 SH3BGRP55822 239 aaPredicted RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 MED21Q13503 144 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 LLGL1Q15334 1064 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 NTRK3Q16288 839 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 RILPL1Q5EBL4 403 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 SNRNP48Q6IEG0 339 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 AADACL2Q6P093 401 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 C3orf62Q6ZUJ4 267 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 ARPINQ7Z6K5 226 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 CFAP61Q8NHU2 1237 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 MRPL1Q9BYD6 325 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 XAB2Q9HCS7 855 aaKnown RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 TIMMDC1Q9NPL8 285 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 FAM217BQ9NTX9 383 aaPredicted RBP10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 SEL1LQ9UBV2 794 aa10.27□□□□□ -0.77
PTCHD4-201ENST00000339488 PXDNLA1KZ92 1463 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 B4E1Z4 1266 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 OCM2P0CE71 109 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 OCMP0CE72 109 aaPredicted RBP10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 NR4A1P22736 598 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 NR1D2Q14995 579 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 PDK3Q15120 406 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 NAB2Q15742 525 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 PDXDC1Q6P996 788 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 NEK10Q6ZWH5 1172 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 C11orf74Q86VG3 221 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 CCDC125Q86Z20 511 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 NELFCDQ8IXH7 590 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 OR6Y1Q8NGX8 325 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 PIP4K2CQ8TBX8 421 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 FBXO6Q9NRD1 293 aaPredicted RBP10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 TELO2Q9Y4R8 837 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 SH3PXD2BA1X283 911 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 PP2D1A8MPX8 630 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 ANKRD63C9JTQ0 380 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 ZBTB43O43298 467 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 RIPK2O43353 540 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 ATP5HO75947 161 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 MYCP01106 439 aaPredicted RBP10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 APOEP02649 317 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 KRT13P13646 458 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 S100A1P23297 94 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 BCAP31P51572 246 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 YARSP54577 528 aaKnown RBP10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 SSRP1Q08945 709 aaKnown RBP10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 PCSK7Q16549 785 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 ASTE1Q2TB18 679 aaPredicted RBP10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 HGSNATQ68CP4 663 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 ANKRD40Q6AI12 368 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 TTI2Q6NXR4 508 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 PDXDC2PQ6P474 469 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 ZNF804AQ7Z570 1209 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 ANKMY2Q8IV38 441 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 POU5F2Q8N7G0 328 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 NCOA7Q8NI08 942 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 PYDC1Q8WXC3 89 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 ANKS1AQ92625 1134 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 HAUS7Q99871 368 aa10.26□□□□□ -0.77
PTCHD4-201ENST00000339488 ANKRD34BA5PLL1 514 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 BHMG1C9JSJ3 638 aaPredicted RBP10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 TLR2O60603 784 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 ZBED4O75132 1171 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 CLPTM1O96005 669 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 CETPP11597 493 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 DR1Q01658 176 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 RALGDSQ12967 914 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 E2F2Q14209 437 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 EFTUD2Q15029 972 aaKnown RBP eCLIP10.25□□□□□ -0.773e-7■□□□□ 10.1
PTCHD4-201ENST00000339488 IYDQ6PHW0 289 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 ELMSAN1Q6PJG2 1045 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 NLRP9Q7RTR0 991 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 HIPK4Q8NE63 616 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 SHISA4Q96DD7 197 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 ZKSCAN3Q9BRR0 538 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 FHDC1Q9C0D6 1143 aaPredicted RBP10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 C4AP0C0L4 1744 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 C4BP0C0L5 1744 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 TRIM75PA6NK02 468 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 BTBD11A6QL63 1104 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 PEX2P28328 305 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 SLC16A2P36021 539 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 WASHC5Q12768 1159 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 TXNRD1Q16881 649 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 MMEL1Q495T6 779 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 PRR23CQ6ZRP0 262 aa10.25□□□□□ -0.77
PTCHD4-201ENST00000339488 RFPL4BQ6ZWI9 263 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms