RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 MAPKAPK5Q8IW41 473 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 TGFBRAP1Q8WUH2 860 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 GRAMD1AQ96CP6 724 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 CORO1BQ9BR76 489 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 DRC3Q9H069 523 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 PCDH18Q9HCL0 1135 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 KCNMB3Q9NPA1 279 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 PARP2Q9UGN5 583 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 COL16A1Q07092 1604 aaPredicted RBP9.89□□□□□ -0.83
RPGR-202ENST00000339363 UBAP1LF5GYI3 381 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 ASLP04424 464 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 H2AFZP0C0S5 128 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 CPA2P48052 419 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 DCTN2Q13561 401 aaKnown RBP9.89□□□□□ -0.83
RPGR-202ENST00000339363 TMEM266Q2M3C6 531 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 GRAMD1BQ3KR37 738 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 TMEM259Q4ZIN3 620 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 KIAA1755Q5JYT7 1200 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 FAM83BQ5T0W9 1011 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 DPY19L2P1Q6NXN4 242 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 CNNM4Q6P4Q7 775 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 PPP1R21Q6ZMI0 780 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 H2AFVQ71UI9 128 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 SAPCD2Q86UD0 394 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 WDR75Q8IWA0 830 aaKnown RBP9.89□□□□□ -0.83
RPGR-202ENST00000339363 SYCE1Q8N0S2 351 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 DDX12PQ92771 950 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 ERP44Q9BS26 406 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 LRMDAQ9H2I8 198 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 SYNCQ9H7C4 482 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 USP40Q9NVE5 1235 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 TUBGCP4Q9UGJ1 667 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 GMEB1Q9Y692 573 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 ROBO1Q9Y6N7 1651 aa9.89□□□□□ -0.83
RPGR-202ENST00000339363 A0A1W2PQJ5 194 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 USP17L5A8MUK1 530 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 ERVV-1B6SEH8 477 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 PPP1R11O60927 126 aaPredicted RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 LRRN2O75325 713 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 HAUS5O94927 633 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 PTPN4P29074 926 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 TRAPPC10P48553 1259 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 USP11P51784 963 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 KCNA1Q09470 495 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 TBL3Q12788 808 aaKnown RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 RFWD3Q6PCD5 774 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 TMCO5AQ8N6Q1 288 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 RBM46Q8TBY0 533 aaKnown RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 ATP8B4Q8TF62 1192 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 TSPAN18Q96SJ8 248 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 C7orf25Q9BPX7 421 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 ADAM33Q9BZ11 813 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 SRP68Q9UHB9 627 aaKnown RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 SMCO2A6NFE2 343 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 RASA4BC9J798 803 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 KLRF2D3W0D1 207 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 RASA4O43374 803 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 CCDC22O60826 627 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 PSMG1O95456 288 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 GM2AP17900 193 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 SLC9A1P19634 815 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 PGM1P36871 562 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 SKIV2L2P42285 1042 aaKnown RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 SERPINB8P50452 374 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 NEK3P51956 506 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 LSAMPQ13449 338 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 DAB2IPQ5VWQ8 1189 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 ALKBH5Q6P6C2 394 aaKnown RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 EPM2AIP1Q7L775 607 aaPredicted RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 EXOC3L1Q86VI1 746 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 TBC1D16Q8TBP0 767 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 RNF25Q96BH1 459 aaPredicted RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 NPHS2Q9NP85 383 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 SSU72P8A0A1W2PR75 194 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 PDLIM1O00151 329 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 OR52Z1P0C646 297 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 SLC18A3Q16572 532 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 MMEL1Q495T6 779 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 GALNTL6Q49A17 601 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 CERKLQ49MI3 558 aaPredicted RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 PABPC1LQ4VXU2 614 aaKnown RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 CC2D2BQ6DHV5 1058 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 C16orf87Q6PH81 154 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 DSTYKQ6XUX3 929 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 ILDR2Q71H61 639 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 ANKRD35Q8N283 1001 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 SYT2Q8N9I0 419 aaPredicted RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 OLIG1Q8TAK6 271 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 UTP6Q9NYH9 597 aaKnown RBP9.88□□□□□ -0.83
RPGR-202ENST00000339363 TMOD2Q9NZR1 351 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 CTNNAL1Q9UBT7 734 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 PHTF1Q9UMS5 762 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 PITPNM2Q9BZ72 1349 aa9.88□□□□□ -0.83
RPGR-202ENST00000339363 A0A0J9YVX5 310 aa9.87□□□□□ -0.83
RPGR-202ENST00000339363 E9PMD0 336 aa9.87□□□□□ -0.83
RPGR-202ENST00000339363 YY1P25490 414 aa9.87□□□□□ -0.83
RPGR-202ENST00000339363 RPL13P26373 211 aaKnown RBP9.87□□□□□ -0.83
RPGR-202ENST00000339363 SERPINB6P35237 376 aa9.87□□□□□ -0.83
RPGR-202ENST00000339363 STAT3P40763 770 aa9.87□□□□□ -0.83
RPGR-202ENST00000339363 CDK7P50613 346 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms