RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 PTPRFP10586 1907 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ZNFX1Q9P2E3 1918 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 IGKV6D-21A0A0A0MT36 114 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 KRIT1O00522 736 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ATMINO43313 823 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SHOX2O60902 331 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 STAM2O75886 525 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CALCAP01258 141 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 GARTP22102 1010 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ACTN2P35609 894 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 GUCY2FP51841 1108 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CLDN10P78369 228 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ENPEPQ07075 957 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CETN1Q12798 172 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 VGLL4Q14135 290 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 UAP1Q16222 522 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 AADACL2Q6P093 401 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PPM1KQ8N3J5 372 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 MCPH1Q8NEM0 835 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ATP8B4Q8TF62 1192 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 MAF1Q9H063 256 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CARD9Q9H257 536 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ATP6V0A4Q9HBG4 840 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 AMACRQ9UHK6 382 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PPP2R3BQ9Y5P8 575 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ALG6Q9Y672 507 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 STYXL1Q9Y6J8 313 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SIP14410 1827 aa13.99□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PTPRJQ12913 1337 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CCDC188H7C350 402 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 RTN2O75298 545 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CELF2O95319 508 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 FGGP02679 453 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 EDNRBP24530 442 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 GTF2H1P32780 548 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 HTRA3P83110 453 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 EMC2Q15006 297 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 BRDTQ58F21 947 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 XKR3Q5GH77 459 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 LBX2Q6XYB7 198 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 RHOT2Q8IXI1 618 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 GPD1LQ8N335 351 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 POMGNT1Q8WZA1 660 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CDCA5Q96FF9 252 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CDHR1Q96JP9 859 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 RNPC3Q96LT9 517 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PI4K2AQ9BTU6 479 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CELF4Q9BZC1 486 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SLITRK6Q9H5Y7 841 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 DHX33Q9H6R0 707 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 RAB20Q9NX57 234 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 TMOD4Q9NZQ9 345 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 OTOFQ9HC10 1997 aa13.98□□□□□ -0.17
CDK5RAP1-201ENST00000339269 TTI1O43156 1089 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CYP1A2P05177 515 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 GZMAP12544 262 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CYP11B1P15538 503 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CAPN2P17655 700 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 COPB2P35606 906 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 FLT3P36888 993 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PEX5P50542 639 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 GPC5P78333 572 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ZNF211Q13398 564 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PRKG1Q13976 671 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ZSCAN26Q16670 478 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 MTERF2Q49AM1 385 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 MIS18BP1Q6P0N0 1132 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 FOXR1Q6PIV2 292 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CRELD2Q6UXH1 353 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 LRRC31Q6UY01 552 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CYFIP1Q7L576 1253 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CD302Q8IX05 232 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 FBXL13Q8NEE6 735 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 WHAMMQ8TF30 809 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 FAM213AQ9BRX8 229 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 HOXC10Q9NYD6 342 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 LRRC37A2A6NM11 1700 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SOWAHBA6NEL2 793 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 TMEM88BA6NKF7 163 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 H0YGN5 161 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 HNRNPDLO14979 420 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PIGRP01833 764 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 GLRA2P23416 452 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ARL2P36404 184 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 USP8P40818 1118 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 MFAP3P55082 362 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 NLRP11P59045 1033 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 PTENP60484 403 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 CDR2Q01850 454 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 ZBTB41Q5SVQ8 909 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 SCARA3Q6AZY7 606 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 TMEM143Q96AN5 459 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 NFS1Q9Y697 457 aa13.97□□□□□ -0.17
CDK5RAP1-201ENST00000339269 GSTTP1A0A1W2PQM5 241 aa13.96□□□□□ -0.17
CDK5RAP1-201ENST00000339269 GOLGA6CA6NDK9 693 aa13.96□□□□□ -0.17
CDK5RAP1-201ENST00000339269 GOLGA8KD6RF30 607 aa13.96□□□□□ -0.17
CDK5RAP1-201ENST00000339269 DKC1O60832 514 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDK5RAP1-201ENST00000339269 VNN1O95497 513 aa13.96□□□□□ -0.17
CDK5RAP1-201ENST00000339269 KRT14P02533 472 aa13.96□□□□□ -0.17
CDK5RAP1-201ENST00000339269 OATP04181 439 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms