RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 KCNK3O14649 394 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 GCNT3O95395 438 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 CXCR5P32302 372 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 STAT2P52630 851 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 OAZ1P54368 228 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 EIF3BP55884 814 aaKnown RBP11.64□□□□□ -0.55
RTN3-201ENST00000338850 PSMC6P62333 389 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 GNGT1P63211 74 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 SLC7A5Q01650 507 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 POU5F1Q01860 360 aaKnown RBP11.64□□□□□ -0.55
RTN3-201ENST00000338850 DRP2Q13474 957 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 DHX34Q14147 1143 aaKnown RBP11.64□□□□□ -0.55
RTN3-201ENST00000338850 TRIM60Q495X7 471 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 C1orf53Q5VUE5 145 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 MAMDC4Q6UXC1 1216 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 MICALCLQ6ZW33 695 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 ZNF720Q7Z2F6 126 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 PEX26Q7Z412 305 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 TADA2BQ86TJ2 420 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 METTL13Q8N6R0 699 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 CHURC1Q8WUH1 139 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 HVCN1Q96D96 273 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 CCDC43Q96MW1 224 aaKnown RBP11.64□□□□□ -0.55
RTN3-201ENST00000338850 LBHD1Q9BQE6 289 aaPredicted RBP11.64□□□□□ -0.55
RTN3-201ENST00000338850 PACSIN1Q9BY11 444 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 RAB17Q9H0T7 212 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 AMFRQ9UKV5 643 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 PRR12Q9ULL5 1215 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 PHF24Q9UPV7 400 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 MRPL11Q9Y3B7 192 aaKnown RBP11.64□□□□□ -0.55
RTN3-201ENST00000338850 CTDP1Q9Y5B0 961 aaPredicted RBP11.64□□□□□ -0.55
RTN3-201ENST00000338850 ARID2Q68CP9 1835 aa11.64□□□□□ -0.55
RTN3-201ENST00000338850 ZNFX1Q9P2E3 1918 aaKnown RBP11.64□□□□□ -0.55
RTN3-201ENST00000338850 SYNGAP1Q96PV0 1343 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 ANKRD62A6NC57 917 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 GOLGA6L10A6NI86 522 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 GCOM1H8Y6P7 765 aaPredicted RBP11.63□□□□□ -0.55
RTN3-201ENST00000338850 MEIS1O00470 390 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 SLITRK3O94933 977 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 SNAI1O95863 264 aaPredicted RBP11.63□□□□□ -0.55
RTN3-201ENST00000338850 PGK1P00558 417 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 POLR2MP0CAP2 368 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 AKR1A1P14550 325 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 NR1D1P20393 614 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 PTENP60484 403 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 LRCH2Q5VUJ6 765 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 ZNF467Q7Z7K2 595 aaPredicted RBP11.63□□□□□ -0.55
RTN3-201ENST00000338850 RNF180Q86T96 592 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 CHST13Q8NET6 341 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 ARL8AQ96BM9 186 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 LENG1Q96BZ8 264 aaPredicted RBP11.63□□□□□ -0.55
RTN3-201ENST00000338850 MS4A14Q96JA4 679 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 FGD4Q96M96 766 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 IWS1Q96ST2 819 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 EPN3Q9H201 632 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 TMEM206Q9H813 350 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 TMEM51Q9NW97 253 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 EHD2Q9NZN4 543 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 APEX2Q9UBZ4 518 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 PRKAG2Q9UGJ0 569 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 FBXO40Q9UH90 709 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 RSPH14Q9UHP6 348 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 DBR1Q9UK59 544 aaKnown RBP11.63□□□□□ -0.55
RTN3-201ENST00000338850 FRMD4BQ9Y2L6 1034 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 NFS1Q9Y697 457 aa11.63□□□□□ -0.55
RTN3-201ENST00000338850 SMCHD1A6NHR9 2005 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 PLXNA1Q9UIW2 1896 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 GOLGA6L10A0A0M3HER8 536 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 EML1O00423 815 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 SART1O43290 800 aaKnown RBP11.62□□□□□ -0.55
RTN3-201ENST00000338850 ADAMTS4O75173 837 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 FDX1P10109 184 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 ACTN1P12814 892 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 ZNF76P36508 570 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 MATR3P43243 847 aaKnown RBP eCLIP11.62□□□□□ -0.551e-6■■□□□ 13.3
RTN3-201ENST00000338850 GALCP54803 685 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 BFSP1Q12934 665 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 ITGB3BPQ13352 177 aaPredicted RBP11.62□□□□□ -0.55
RTN3-201ENST00000338850 PLCB4Q15147 1175 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 CEP55Q53EZ4 464 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 DCAF17Q5H9S7 520 aaPredicted RBP11.62□□□□□ -0.55
RTN3-201ENST00000338850 INTS8Q75QN2 995 aaKnown RBP11.62□□□□□ -0.55
RTN3-201ENST00000338850 Q7L0L9 218 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 TAX1BP1Q86VP1 789 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 ANKRD35Q8N283 1001 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 LNX1Q8TBB1 728 aaPredicted RBP11.62□□□□□ -0.55
RTN3-201ENST00000338850 BCAS4Q8TDM0 211 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 CTNNBL1Q8WYA6 563 aaPredicted RBP11.62□□□□□ -0.55
RTN3-201ENST00000338850 P3H4Q92791 437 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 KCNN1Q92952 543 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 GJA10Q969M2 543 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 RPS6KC1Q96S38 1066 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 TEKT3Q9BXF9 490 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 TXLNGYQ9BZA5 131 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 MAF1Q9H063 256 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 PDLIM7Q9NR12 457 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 AGPAT3Q9NRZ7 376 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 SMARCAL1Q9NZC9 954 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 LCMT1Q9UIC8 334 aa11.62□□□□□ -0.55
RTN3-201ENST00000338850 DNAH12Q6ZR08 3092 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms