RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 RECQL4O94761 1208 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 DDHD2O94830 711 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 EDN1P05305 212 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 THP07101 528 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 PBX3P40426 434 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 GRM5P41594 1212 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 SLC11A1P49279 550 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 MRPS5P82675 430 aaKnown RBP12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 ALCAMQ13740 583 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 NOLC1Q14978 699 aaKnown RBP eCLIP12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 ADALQ6DHV7 355 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 EP400NLQ6ZTU2 488 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 STXBP4Q6ZWJ1 553 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 TAS1R3Q7RTX0 852 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 ZNF280BQ86YH2 543 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 IGSF21Q96ID5 467 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 ACAP3Q96P50 834 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 TCF25Q9BQ70 676 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 C1QTNF1Q9BXJ1 281 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 CDT1Q9H211 546 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 ST6GALNAC4Q9H4F1 302 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 PTPRHQ9HD43 1115 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 PANK4Q9NVE7 773 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 ANKFY1Q9P2R3 1169 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 DNAJB4Q9UDY4 337 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 USP25Q9UHP3 1055 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 KCNH3Q9ULD8 1083 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 EXOC7Q9UPT5 735 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 MYH11P35749 1972 aa12.4□□□□□ -0.42
SLC28A1-202ENST00000338602 GOLGA6L4A6NEF3 574 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 NRP1O14786 923 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 HARSP12081 509 aaKnown RBP12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 PROZP22891 400 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 CMA1P23946 247 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 DNAJB1P25685 340 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 NMT1P30419 496 aaKnown RBP12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 CA8P35219 290 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 AFF1P51825 1210 aaKnown RBP12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 GTF2BQ00403 316 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 CAMK1Q14012 370 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 SMC1AQ14683 1233 aaKnown RBP12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 E2F4Q16254 413 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 SLFN12LQ6IEE8 588 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 ZNF720Q7Z2F6 126 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 DDX53Q86TM3 631 aaKnown RBP12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 SFR1Q86XK3 245 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 COLGALT2Q8IYK4 626 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 DNAJC19Q96DA6 116 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 CCDC34Q96HJ3 373 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 CDCA3Q99618 268 aaPredicted RBP12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 TLE6Q9H808 572 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 KBTBD4Q9NVX7 518 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 MIOSQ9NXC5 875 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 SSX2IPQ9Y2D8 614 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 HCN4Q9Y3Q4 1203 aa12.39□□□□□ -0.43
SLC28A1-202ENST00000338602 KIAA1671Q9BY89 1806 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 GCNT3O95395 438 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 PIGRP01833 764 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 SRGAP2BP0DMP2 458 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 IRS1P35568 1242 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 ERVFC1P60507 584 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 OSTNP61366 133 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 ASIC1P78348 528 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 MCL1Q07820 350 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 DSC1Q08554 894 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 TUSC3Q13454 348 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 PLPP4Q5VZY2 271 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 MAP4K3Q8IVH8 894 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 VPS52Q8N1B4 723 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 PABPC5Q96DU9 382 aaKnown RBP12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 ACCSQ96QU6 501 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 IGFLR1Q9H665 355 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 UBE2ZQ9H832 354 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 OLFML3Q9NRN5 406 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 SLC38A7Q9NVC3 462 aa12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 PRG3Q9Y2Y8 225 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-202ENST00000338602 TRANK1O15050 2925 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 FSCN2O14926 492 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 TADA2AO75478 443 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 CXCL14O95715 111 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 CLTAP09496 248 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 NRIP1P48552 1158 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 HYAL1Q12794 435 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 POSTNQ15063 836 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 RBM23Q86U06 439 aaKnown RBP12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 SYCP3Q8IZU3 236 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 GSTCDQ8NEC7 633 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 ADAMTS19Q8TE59 1207 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 STAMQ92783 540 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 ZBTB45Q96K62 511 aaPredicted RBP12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 UROC1Q96N76 676 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 IPO9Q96P70 1041 aaKnown RBP12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 ASB2Q96Q27 587 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 UHRF1Q96T88 793 aaPredicted RBP12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 C7orf25Q9BPX7 421 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 TRIM9Q9C026 710 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 TMEM206Q9H813 350 aa12.37□□□□□ -0.43
SLC28A1-202ENST00000338602 CLDND1Q9NY35 253 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms