RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 FBXW11Q9UKB1 542 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 COL4A3Q01955 1670 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 STK36Q9NRP7 1315 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 B4GALT5O43286 388 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 TADA2AO75478 443 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 DGAT1O75907 488 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 BAG4O95429 457 aaKnown RBP12.76□□□□□ -0.37
CSMD2-202ENST00000338325 XBP1P17861 261 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 ARL2P36404 184 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 STARD6P59095 220 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 HSP90AA2PQ14568 343 aaPredicted RBP12.76□□□□□ -0.37
CSMD2-202ENST00000338325 PRSS55Q6UWB4 352 aaPredicted RBP12.76□□□□□ -0.37
CSMD2-202ENST00000338325 GRASPQ7Z6J2 395 aaPredicted RBP12.76□□□□□ -0.37
CSMD2-202ENST00000338325 ST13P5Q8NFI4 369 aaPredicted RBP12.76□□□□□ -0.37
CSMD2-202ENST00000338325 RUBCNQ92622 972 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 RABGGTAQ92696 567 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 FGF14Q92915 247 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 KLK14Q9P0G3 267 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 PARP2Q9UGN5 583 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 CACNA1IQ9P0X4 2223 aa12.76□□□□□ -0.37
CSMD2-202ENST00000338325 OTOGLQ3ZCN5 2332 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 MED19A0JLT2 244 aaPredicted RBP12.75□□□□□ -0.37
CSMD2-202ENST00000338325 POTEMA6NI47 508 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 CDKL5O76039 1030 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 SLITRK3O94933 977 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 LYPLA2O95372 231 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 HNRNPA1P09651 372 aaKnown RBP eCLIP12.75□□□□□ -0.37
CSMD2-202ENST00000338325 GLULP15104 373 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 GLRA2P23416 452 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 PUM1Q14671 1186 aaKnown RBP eCLIP12.75□□□□□ -0.37
CSMD2-202ENST00000338325 RTP2Q5QGT7 225 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 LIN9Q5TKA1 542 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 PARM1Q6UWI2 310 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 MTSS1LQ765P7 747 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 CDR2LQ86X02 465 aaPredicted RBP12.75□□□□□ -0.37
CSMD2-202ENST00000338325 OXER1Q8TDS5 423 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 CCDC43Q96MW1 224 aaKnown RBP12.75□□□□□ -0.37
CSMD2-202ENST00000338325 EIF2AK1Q9BQI3 630 aaKnown RBP12.75□□□□□ -0.37
CSMD2-202ENST00000338325 RPP25Q9BUL9 199 aaKnown RBP12.75□□□□□ -0.37
CSMD2-202ENST00000338325 ANKEF1Q9NU02 776 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 CACNG4Q9UBN1 327 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 CDH7Q9ULB5 785 aa12.75□□□□□ -0.37
CSMD2-202ENST00000338325 NOTCH4Q99466 2003 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 A0A1B0GUA9 196 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 EPB41L2O43491 1005 aaKnown RBP12.74□□□□□ -0.37
CSMD2-202ENST00000338325 LRRN2O75325 713 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 HOXA9P31269 272 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 GPC5P78333 572 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 TUSC3Q13454 348 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 PSMD5Q16401 504 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 PPM1LQ5SGD2 360 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 HASPINQ8TF76 798 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 PIK3R5Q8WYR1 880 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 CLSTN3Q9BQT9 956 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 PAAF1Q9BRP4 392 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 TTPALQ9BTX7 342 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 DDX23Q9BUQ8 820 aaKnown RBP12.74□□□□□ -0.37
CSMD2-202ENST00000338325 TM6SF1Q9BZW5 370 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 POLR3FQ9H1D9 316 aaPredicted RBP12.74□□□□□ -0.37
CSMD2-202ENST00000338325 DNAH14Q0VDD8 3507 aa12.74□□□□□ -0.37
CSMD2-202ENST00000338325 KANSL1LA0AUZ9 987 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 CASTOR2A6NHX0 329 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 KINO60870 393 aaKnown RBP12.73□□□□□ -0.37
CSMD2-202ENST00000338325 KIF4AO95239 1232 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 C8AP07357 584 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 RARRES1P49788 294 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 NTHL1P78549 312 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 PRKCQQ04759 706 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 SCRN1Q12765 414 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 SNW1Q13573 536 aaKnown RBP12.73□□□□□ -0.37
CSMD2-202ENST00000338325 MLF2Q15773 248 aaPredicted RBP12.73□□□□□ -0.37
CSMD2-202ENST00000338325 ZNF528Q3MIS6 628 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 EARS2Q5JPH6 523 aaKnown RBP12.73□□□□□ -0.37
CSMD2-202ENST00000338325 FAM171A1Q5VUB5 890 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 MAML2Q8IZL2 1156 aaPredicted RBP12.73□□□□□ -0.37
CSMD2-202ENST00000338325 LNX1Q8TBB1 728 aaPredicted RBP12.73□□□□□ -0.37
CSMD2-202ENST00000338325 HSD17B14Q9BPX1 270 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 BCO2Q9BYV7 579 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 GJB4Q9NTQ9 266 aa12.73□□□□□ -0.37
CSMD2-202ENST00000338325 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 LRRIQ4A6NIV6 560 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 CCL16O15467 120 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 LAMTOR5O43504 91 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 XYLBO75191 536 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 POU2F2P09086 479 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 PDXDC1Q6P996 788 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 CEP57Q86XR8 500 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 DCLK2Q8N568 766 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 SUMF1Q8NBK3 374 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 FGF13Q92913 245 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 BORCS6Q96GS4 357 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 PRIMPOLQ96LW4 560 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 OSBPL6Q9BZF3 934 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 PDRG1Q9NUG6 133 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 PRMT7Q9NVM4 692 aaPredicted RBP12.72□□□□□ -0.37
CSMD2-202ENST00000338325 SPATA6Q9NWH7 488 aaPredicted RBP12.72□□□□□ -0.37
CSMD2-202ENST00000338325 DLL3Q9NYJ7 618 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 FBXO4Q9UKT5 387 aa12.72□□□□□ -0.37
CSMD2-202ENST00000338325 PCDHA12Q9UN75 941 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms