RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 RHOP08100 348 aa17.42■□□□□ 0.38
TSPO-202ENST00000337554 PSMC3P17980 439 aa17.42■□□□□ 0.38
TSPO-202ENST00000337554 FAM193AP78312 1265 aa17.42■□□□□ 0.38
TSPO-202ENST00000337554 CCINQ13939 588 aa17.42■□□□□ 0.38
TSPO-202ENST00000337554 DGKKQ5KSL6 1271 aa17.42■□□□□ 0.38
TSPO-202ENST00000337554 SCLT1Q96NL6 688 aa17.42■□□□□ 0.38
TSPO-202ENST00000337554 UBAC1Q9BSL1 405 aa17.42■□□□□ 0.38
TSPO-202ENST00000337554 GCOM2Q9BZD3 368 aaPredicted RBP17.42■□□□□ 0.38
TSPO-202ENST00000337554 AVENQ9NQS1 362 aaPredicted RBP17.42■□□□□ 0.38
TSPO-202ENST00000337554 CEP131Q9UPN4 1083 aa17.42■□□□□ 0.38
TSPO-202ENST00000337554 PCDHB15Q9Y5E8 787 aa17.42■□□□□ 0.38
TSPO-202ENST00000337554 H0Y626 953 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 J3QKU1 62 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 DCLK1O15075 740 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 MEFVO15553 781 aaPredicted RBP17.41■□□□□ 0.38
TSPO-202ENST00000337554 TRIM16O95361 564 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 IRX4P78413 519 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 SRSF1Q07955 248 aaKnown RBP eCLIP17.41■□□□□ 0.38
TSPO-202ENST00000337554 PRSS36Q5K4E3 855 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 UBXN11Q5T124 520 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 MIS18BP1Q6P0N0 1132 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 ASB16Q96NS5 453 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 DCTPP1Q9H773 170 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 PSTPIP2Q9H939 334 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 CNTNAP2Q9UHC6 1331 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 PLXNB3Q9ULL4 1909 aa17.41■□□□□ 0.38
TSPO-202ENST00000337554 A0A087WZ62 844 aa17.4■□□□□ 0.38
TSPO-202ENST00000337554 MEIS1O00470 390 aa17.4■□□□□ 0.38
TSPO-202ENST00000337554 KHNYNO15037 678 aaKnown RBP17.4■□□□□ 0.38
TSPO-202ENST00000337554 ATXN7O15265 892 aaPredicted RBP17.4■□□□□ 0.38
TSPO-202ENST00000337554 KIF5BP33176 963 aa17.4■□□□□ 0.38
TSPO-202ENST00000337554 CREMQ03060 361 aa17.4■□□□□ 0.38
TSPO-202ENST00000337554 CEP55Q53EZ4 464 aa17.4■□□□□ 0.38
TSPO-202ENST00000337554 AXDND1Q5T1B0 1012 aaPredicted RBP17.4■□□□□ 0.38
TSPO-202ENST00000337554 CYB5R4Q7L1T6 521 aa17.4■□□□□ 0.38
TSPO-202ENST00000337554 ZSWIM3Q96MP5 696 aa17.4■□□□□ 0.38
TSPO-202ENST00000337554 FDXACB1Q9BRP7 624 aaPredicted RBP17.4■□□□□ 0.38
TSPO-202ENST00000337554 DDX19BQ9UMR2 479 aa17.4■□□□□ 0.38
TSPO-202ENST00000337554 SHROOM3Q8TF72 1996 aa17.39■□□□□ 0.37
TSPO-202ENST00000337554 PIEZO2Q9H5I5 2752 aa17.39■□□□□ 0.37
TSPO-202ENST00000337554 SFPQP23246 707 aaKnown RBP eCLIP17.39■□□□□ 0.37
TSPO-202ENST00000337554 NMIQ13287 307 aaPredicted RBP17.39■□□□□ 0.37
TSPO-202ENST00000337554 LNX1Q8TBB1 728 aaPredicted RBP17.39■□□□□ 0.37
TSPO-202ENST00000337554 RABGGTAQ92696 567 aa17.39■□□□□ 0.37
TSPO-202ENST00000337554 TCEAL4Q96EI5 215 aa17.39■□□□□ 0.37
TSPO-202ENST00000337554 SLC32A1Q9H598 525 aa17.39■□□□□ 0.37
TSPO-202ENST00000337554 POLR3BQ9NW08 1133 aaPredicted RBP17.39■□□□□ 0.37
TSPO-202ENST00000337554 URB1O60287 2271 aaKnown RBP17.38■□□□□ 0.37
TSPO-202ENST00000337554 PDCD11Q14690 1871 aaKnown RBP17.38■□□□□ 0.37
TSPO-202ENST00000337554 SLC38A8A6NNN8 435 aa17.38■□□□□ 0.37
TSPO-202ENST00000337554 VIPR2P41587 438 aa17.38■□□□□ 0.37
TSPO-202ENST00000337554 UVSSAQ2YD98 709 aa17.38■□□□□ 0.37
TSPO-202ENST00000337554 CCNI2Q6ZMN8 369 aaPredicted RBP17.38■□□□□ 0.37
TSPO-202ENST00000337554 SMG8Q8ND04 991 aaKnown RBP17.38■□□□□ 0.37
TSPO-202ENST00000337554 MSANTD3Q96H12 275 aa17.38■□□□□ 0.37
TSPO-202ENST00000337554 COLEC11Q9BWP8 271 aa17.38■□□□□ 0.37
TSPO-202ENST00000337554 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
TSPO-202ENST00000337554 AGPAT5Q9NUQ2 364 aa17.38■□□□□ 0.37
TSPO-202ENST00000337554 ADAM28Q9UKQ2 775 aa17.38■□□□□ 0.37
TSPO-202ENST00000337554 SALL3Q9BXA9 1300 aa17.38■□□□□ 0.37
TSPO-202ENST00000337554 NUP205Q92621 2012 aa17.38■□□□□ 0.37
TSPO-202ENST00000337554 WDR27A2RRH5 827 aa17.37■□□□□ 0.37
TSPO-202ENST00000337554 MYBPHLA2RUH7 354 aa17.37■□□□□ 0.37
TSPO-202ENST00000337554 SPDYE3A6NKU9 549 aa17.37■□□□□ 0.37
TSPO-202ENST00000337554 HOXA11P31270 313 aaPredicted RBP17.37■□□□□ 0.37
TSPO-202ENST00000337554 CCR2P41597 374 aa17.37■□□□□ 0.37
TSPO-202ENST00000337554 SEMA3BQ13214 749 aa17.37■□□□□ 0.37
TSPO-202ENST00000337554 SYNPOQ8N3V7 929 aa17.37■□□□□ 0.37
TSPO-202ENST00000337554 EVI5LQ96CN4 794 aa17.37■□□□□ 0.37
TSPO-202ENST00000337554 GAD1Q99259 594 aa17.37■□□□□ 0.37
TSPO-202ENST00000337554 GABBR1Q9UBS5 961 aa17.37■□□□□ 0.37
TSPO-202ENST00000337554 CCDC194A0A1B0GVG4 234 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 ARL5CA6NH57 179 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 UPK3BL1B0FP48 263 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 UPK3BL2E5RIL1 263 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 SPECC1L-ADORA2AF8WAN1 911 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 ZNF263O14978 683 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 RHOBTB1O94844 696 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 CTHP32929 405 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 SCNN1GP51170 649 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 ELF2Q15723 593 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 C1orf228Q6PIY5 440 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 GSTCDQ8NEC7 633 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 DEPDC1BQ8WUY9 529 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 RSPRY1Q96DX4 576 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 ZFP42Q96MM3 310 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 SPZ1Q9BXG8 430 aa17.36■□□□□ 0.37
TSPO-202ENST00000337554 C8orf33Q9H7E9 229 aaPredicted RBP17.36■□□□□ 0.37
TSPO-202ENST00000337554 MYH9P35579 1960 aaKnown RBP17.35■□□□□ 0.37
TSPO-202ENST00000337554 MLH1P40692 756 aa17.35■□□□□ 0.37
TSPO-202ENST00000337554 PON2Q15165 354 aa17.35■□□□□ 0.37
TSPO-202ENST00000337554 CATSPER4Q7RTX7 472 aa17.35■□□□□ 0.37
TSPO-202ENST00000337554 MFSD6LQ8IWD5 586 aa17.35■□□□□ 0.37
TSPO-202ENST00000337554 SMARCD2Q92925 531 aa17.35■□□□□ 0.37
TSPO-202ENST00000337554 PGBD1Q96JS3 809 aa17.35■□□□□ 0.37
TSPO-202ENST00000337554 CEP89Q96ST8 783 aa17.35■□□□□ 0.37
TSPO-202ENST00000337554 KRT23Q9C075 422 aa17.35■□□□□ 0.37
TSPO-202ENST00000337554 CACNG4Q9UBN1 327 aa17.35■□□□□ 0.37
TSPO-202ENST00000337554 A0A087WV48 116 aa17.34■□□□□ 0.37
TSPO-202ENST00000337554 MOSPD3O75425 235 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms