RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 M0QYV0 167 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 PSMD10O75832 226 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 VTNP04004 478 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 CPB1P15086 417 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 SH3D19Q5HYK7 790 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 KAZNQ674X7 775 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 UBQLN1Q9UMX0 589 aaKnown RBP9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 PASKQ96RG2 1323 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 PPP1R3GB7ZBB8 358 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 FMR1Q06787 632 aaKnown RBP eCLIP9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 TADA2BQ86TJ2 420 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 RFX6Q8HWS3 928 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 TSC1Q92574 1164 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 SPTLC3Q9NUV7 552 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 MORC2Q9Y6X9 1032 aaPredicted RBP9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 CDK5RAP2Q96SN8 1893 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 RSPH10B2B2RC85 870 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 LGALS2P05162 132 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 RSPH10BP0C881 870 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 CYP27A1Q02318 531 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 LGSNQ5TDP6 509 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 L3MBTL3Q96JM7 780 aaPredicted RBP9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 GPRC5CQ9NQ84 441 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 CYP2C19P33261 490 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 ITIH3Q06033 890 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 IQCB1Q15051 598 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 MAPRE1Q15691 268 aaKnown RBP9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 PPTC7Q8NI37 304 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 MORC4Q8TE76 937 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 SETD4Q9NVD3 440 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 CNOT8Q9UFF9 292 aaKnown RBP9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 ARAP2Q8WZ64 1704 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 IFNB1P01574 187 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 HMGCRP04035 888 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 CASC4Q6P4E1 433 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 SPATA2LQ8IUW3 424 aaPredicted RBP9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 RNF10Q8N5U6 811 aaKnown RBP9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 KIFC3Q9BVG8 833 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 RNF208Q9H0X6 261 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 MIF4GDA9UHW6 222 aaKnown RBP9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 YBX3P16989 372 aaKnown RBP eCLIP9.95□□□□□ -0.821e-9■■□□□ 11.8
FNDC3B-201ENST00000336824 ZCCHC17Q9NP64 241 aaKnown RBP9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 SLC8A2Q9UPR5 921 aa9.95□□□□□ -0.82
FNDC3B-201ENST00000336824 CNTNAP1P78357 1384 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 KRT1P04264 644 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 SRGAP2BP0DMP2 458 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 KCNA3P22001 575 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 PTGISQ16647 500 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 ARFGAP2Q8N6H7 521 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 HPDLQ96IR7 371 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 DNAJC18Q9H819 358 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 ANAPC7Q9UJX3 599 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 A0A1B0GUL6 1792 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 CCDC66A2RUB6 948 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 H7C0C1 242 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 PGRMC1O00264 195 aaKnown RBP9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 ZNF189O75820 626 aaPredicted RBP9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 ATP5OP48047 213 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 FSTL1Q12841 308 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 COLEC11Q9BWP8 271 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 NT5C1AQ9BXI3 368 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 PARVAQ9NVD7 372 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 ZNF148Q9UQR1 794 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 LAMA4Q16363 1823 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 COL1A2P08123 1366 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 SNED1Q8TER0 1413 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 TTC26A0AVF1 554 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 NOP14P78316 857 aaKnown RBP9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 SHROOM1Q2M3G4 852 aaPredicted RBP9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 ZNF677Q86XU0 584 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 KANSL3Q9P2N6 904 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 SNX9Q9Y5X1 595 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 A0A1W2PQJ5 194 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 PFDN6O15212 129 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 ZC3H11AO75152 810 aaKnown RBP eCLIP9.94□□□□□ -0.822e-7■□□□□ 9.7
FNDC3B-201ENST00000336824 ODC1P11926 461 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 PHBP35232 272 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 ALDH7A1P49419 539 aaKnown RBP9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 KRT17Q04695 432 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 ZPBP2Q6X784 338 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 C4orf50Q6ZRC1 276 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 NSRP1Q9H0G5 558 aaKnown RBP9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 ZNF18P17022 549 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 NR1I3Q14994 352 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 SLAIN1Q8ND83 568 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 NIF3L1Q9GZT8 377 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 SLITRK6Q9H5Y7 841 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 WDR35Q9P2L0 1181 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 IP6K2Q9UHH9 426 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 TAF6P49848 677 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 CYP4F22Q6NT55 531 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 PASD1Q8IV76 773 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 SLC35F6Q8N357 371 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 ACRBPQ8NEB7 543 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 RBM41Q96IZ5 413 aaKnown RBP9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 PLCB1Q9NQ66 1216 aa9.94□□□□□ -0.82
FNDC3B-201ENST00000336824 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 HLA-DRAP01903 254 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 PDXDC1Q6P996 788 aa9.93□□□□□ -0.82
FNDC3B-201ENST00000336824 PPP1R21Q6ZMI0 780 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms