RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ZNF484Q5JVG2 852 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 PCNX4Q63HM2 1172 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 RAB44Q7Z6P3 723 aaPredicted RBP15.96■□□□□ 0.15
C9orf47-201ENST00000334490 RBBP8NLQ8NC74 664 aaPredicted RBP15.96■□□□□ 0.15
C9orf47-201ENST00000334490 CALR3Q96L12 384 aaKnown RBP15.96■□□□□ 0.15
C9orf47-201ENST00000334490 ASCC2Q9H1I8 757 aaPredicted RBP15.96■□□□□ 0.15
C9orf47-201ENST00000334490 INTS9Q9NV88 658 aaKnown RBP15.96■□□□□ 0.15
C9orf47-201ENST00000334490 PRG3Q9Y2Y8 225 aaPredicted RBP15.96■□□□□ 0.15
C9orf47-201ENST00000334490 STILQ15468 1287 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 ARRDC4Q8NCT1 418 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 HVCN1Q96D96 273 aa15.96■□□□□ 0.15
C9orf47-201ENST00000334490 PODXLO00592 558 aa15.96■□□□□ 0.14
C9orf47-201ENST00000334490 EXTL3O43909 919 aa15.96■□□□□ 0.14
C9orf47-201ENST00000334490 CYP2C8P10632 490 aa15.96■□□□□ 0.14
C9orf47-201ENST00000334490 PPATQ06203 517 aa15.96■□□□□ 0.14
C9orf47-201ENST00000334490 NTRK3Q16288 839 aa15.96■□□□□ 0.14
C9orf47-201ENST00000334490 C15orf52Q6ZUT6 534 aaKnown RBP15.96■□□□□ 0.14
C9orf47-201ENST00000334490 TTC30AQ86WT1 665 aa15.96■□□□□ 0.14
C9orf47-201ENST00000334490 PRPF31Q8WWY3 499 aaKnown RBP15.96■□□□□ 0.14
C9orf47-201ENST00000334490 TBX20Q9UMR3 447 aa15.96■□□□□ 0.14
C9orf47-201ENST00000334490 ANO9A1A5B4 782 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 NEMP1O14524 444 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 CLTAP09496 248 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 KLRC1P26715 233 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 CDH6P55285 790 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 NOP14P78316 857 aaKnown RBP15.95■□□□□ 0.14
C9orf47-201ENST00000334490 CERS5Q8N5B7 392 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 MKNK1Q9BUB5 465 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 FSD1LQ9BXM9 530 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 EFCC1Q9HA90 598 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 SEC31AO94979 1220 aaKnown RBP15.95■□□□□ 0.14
C9orf47-201ENST00000334490 SLC30A5Q8TAD4 765 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 FAM198AQ9UFP1 575 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 SLC9A1P19634 815 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 POTEAQ6S8J7 498 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 PCSK9Q8NBP7 692 aaKnown RBP15.95■□□□□ 0.14
C9orf47-201ENST00000334490 DNERQ8NFT8 737 aa15.95■□□□□ 0.14
C9orf47-201ENST00000334490 A0A1B0GTH6 734 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 DCDC2CA8MYV0 355 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 RSPH10B2B2RC85 870 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 STRNO43815 780 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 RSPH10BP0C881 870 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 IL9RQ01113 521 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 IQCB1Q15051 598 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 PTPAQ15257 358 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 KIZQ2M2Z5 673 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 FAM49BQ9NUQ9 324 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 NCK2O43639 380 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 WEE2P0C1S8 567 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 SNRPFP62306 86 aaKnown RBP15.94■□□□□ 0.14
C9orf47-201ENST00000334490 ACCSLQ4AC99 568 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 CACNA2D3Q8IZS8 1091 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 CAPS2Q9BXY5 557 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 PARD6BQ9BYG5 372 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 CACYBPQ9HB71 228 aaKnown RBP15.94■□□□□ 0.14
C9orf47-201ENST00000334490 TMEM8AQ9HCN3 771 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 NOC2LQ9Y3T9 749 aaKnown RBP15.94■□□□□ 0.14
C9orf47-201ENST00000334490 RTN2O75298 545 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 PCSK1P29120 753 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 HEATR6Q6AI08 1181 aaKnown RBP15.94■□□□□ 0.14
C9orf47-201ENST00000334490 METTL7BQ6UX53 244 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 VPS39Q96JC1 886 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 NT5C1AQ9BXI3 368 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 TTC7AQ9ULT0 858 aaPredicted RBP15.94■□□□□ 0.14
C9orf47-201ENST00000334490 GAKO14976 1311 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 ACSL3O95573 720 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 PPARGP37231 505 aaPredicted RBP15.94■□□□□ 0.14
C9orf47-201ENST00000334490 ATN1P54259 1190 aaPredicted RBP15.94■□□□□ 0.14
C9orf47-201ENST00000334490 RHBDL3P58872 404 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 TAP1Q03518 808 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 VGLL4Q14135 290 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 PKN1Q16512 942 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 CC2D1AQ6P1N0 951 aaPredicted RBP15.94■□□□□ 0.14
C9orf47-201ENST00000334490 FAM71BQ8TC56 605 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 MRIQ9BWK5 157 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 KLK14Q9P0G3 267 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 NFU1Q9UMS0 254 aa15.94■□□□□ 0.14
C9orf47-201ENST00000334490 PACSIN2Q9UNF0 486 aaPredicted RBP15.94■□□□□ 0.14
C9orf47-201ENST00000334490 BAZ2BQ9UIF8 2168 aaKnown RBP15.94■□□□□ 0.14
C9orf47-201ENST00000334490 PRRG1O14668 218 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 RASGRF2O14827 1237 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 PTPRAP18433 802 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 ASPHQ12797 758 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 SV2CQ496J9 727 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 SEZ6Q53EL9 994 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 KIAA1755Q5JYT7 1200 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 CPA5Q8WXQ8 436 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 AGPAT3Q9NRZ7 376 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 TJP2Q9UDY2 1190 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 H3BRB1 525 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 H3BRJ5 948 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 EVI5O60447 810 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 PDGFRAP16234 1089 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 TOB1P50616 345 aaPredicted RBP15.93■□□□□ 0.14
C9orf47-201ENST00000334490 WHAMMQ8TF30 809 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 DEPDC1BQ8WUY9 529 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 IFT43Q96FT9 208 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 TUT1Q9H6E5 874 aaKnown RBP15.93■□□□□ 0.14
C9orf47-201ENST00000334490 FHOD1Q9Y613 1164 aa15.93■□□□□ 0.14
C9orf47-201ENST00000334490 UBR1Q8IWV7 1749 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms