RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 SERPINH1P50454 418 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PDIA2Q13087 525 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ZNF677Q86XU0 584 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SETD9Q8NE22 299 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ENKURQ8TC29 256 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 DBNDD2Q9BQY9 259 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 A0A0D9SFI3 127 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 MED26O95402 600 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PTPN4P29074 926 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 NCF4Q15080 339 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 RBBP7Q16576 425 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ERICH1Q86X53 443 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ZBTB38Q8NAP3 1195 aaPredicted RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 KLHL23Q8NBE8 558 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 VPS37AQ8NEZ2 397 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 DGCR14Q96DF8 476 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PGBD1Q96JS3 809 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ZFYVE19Q96K21 471 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 RNPC3Q96LT9 517 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 CPSF3Q9UKF6 684 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SPATA31E1Q6ZUB1 1445 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 USP1O94782 785 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 XPAP23025 273 aaPredicted RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 TGFBR2P37173 567 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 HADHAP40939 763 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 FNTAP49354 379 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 STILQ15468 1287 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ANGPTL8Q6UXH0 198 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 MIGA2Q7L4E1 593 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 FAM81AQ8TBF8 368 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PDCD6IPQ8WUM4 868 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 L2HGDHQ9H9P8 463 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ADD3Q9UEY8 706 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SORCS3Q9UPU3 1222 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ADGRA2Q96PE1 1338 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 UNC13AQ9UPW8 1703 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 EPHB1P54762 984 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 GEMIN4P57678 1058 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 C16orf72Q14CZ0 275 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 MSL3Q8N5Y2 521 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ARHGEF26Q96DR7 871 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ACAP3Q96P50 834 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 STAP1Q9ULZ2 295 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 NCKAP5LQ9HCH0 1330 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SPDYE2BA6NHP3 402 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PER1O15534 1290 aaPredicted RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SPDYE6P0CI01 402 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 KRT17Q04695 432 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 MAPRE1Q15691 268 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 RGS21Q2M5E4 152 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SDE2Q6IQ49 451 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 TRMT2AQ8IZ69 625 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 FAM167AQ96KS9 214 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ZWILCHQ9H900 591 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 TAGLN3Q9UI15 199 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SPHKAPQ2M3C7 1700 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SLCO1B7G3V0H7 640 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 RNF103O00237 685 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 POLR2EP19388 210 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 TPP2P29144 1249 aaPredicted RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PLA2G4AP47712 749 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ADCY1Q08828 1119 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 FBXO11Q86XK2 927 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SFR1Q86XK3 245 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 KCNV2Q8TDN2 545 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 NR1H4Q96RI1 486 aaPredicted RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PACSIN1Q9BY11 444 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SOX13Q9UN79 622 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 E5RI56 91 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 CPA1P15085 419 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PRLRP16471 622 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ALDH1B1P30837 517 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 NAA20P61599 178 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 CDK17Q00537 523 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SGSM1Q2NKQ1 1148 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 C17orf50Q8WW18 174 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 MCRS1Q96EZ8 462 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 RMND5BQ96G75 393 aaPredicted RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PCDHB8Q9UN66 801 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PCDHGB4Q9UN71 923 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 RTCBQ9Y3I0 505 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 KLRF2D3W0D1 207 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 SCTRP47872 440 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ANXA11P50995 505 aaKnown RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 TIMM50Q3ZCQ8 353 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 DCAF15Q66K64 600 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 NFRKBQ6P4R8 1299 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 C19orf18Q8NEA5 215 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 GJA10Q969M2 543 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 MTSS1O43312 755 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PSTPIP1O43586 416 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 PSAPP07602 524 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ABCB1P08183 1280 aaPredicted RBP5.81□□□□□ -1.48
PTPRB-202ENST00000334414 RAB25P57735 213 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 RUNDC3AQ59EK9 446 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 ASAP3Q8TDY4 903 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 IP6K1Q92551 441 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 MYL10Q9BUA6 226 aa5.81□□□□□ -1.48
PTPRB-202ENST00000334414 DCTN4Q9UJW0 460 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms