RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 GRIK3Q13003 919 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 CAMK1Q14012 370 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 KYAT1Q16773 422 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 CNNM4Q6P4Q7 775 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 SFR1Q86XK3 245 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 HVCN1Q96D96 273 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 ZBTB45Q96K62 511 aaPredicted RBP15.34■□□□□ 0.05
LIMS1-201ENST00000332345 ACAP3Q96P50 834 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 FIZ1Q96SL8 496 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 TRIM9Q9C026 710 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 CDT1Q9H211 546 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 TLR9Q9NR96 1032 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 OLFML3Q9NRN5 406 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 TOPORSQ9NS56 1045 aaPredicted RBP15.34■□□□□ 0.05
LIMS1-201ENST00000332345 DNAJB4Q9UDY4 337 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 PRUNE2Q8WUY3 3088 aa15.34■□□□□ 0.05
LIMS1-201ENST00000332345 PLXNA4Q9HCM2 1894 aa15.33■□□□□ 0.05
LIMS1-201ENST00000332345 A0A1W2PQ27 194 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 A0A1W2PQ64 194 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 A0A1W2PQD8 194 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 FRMD3A2A2Y4 597 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 GOLGA6L4A6NEF3 574 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 NRP1O14786 923 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 HNRNPDLO14979 420 aaKnown RBP15.33■□□□□ 0.04
LIMS1-201ENST00000332345 PIGRP01833 764 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 OR1G1P47890 313 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 SLC11A1P49279 550 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 MCL1Q07820 350 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 ALCAMQ13740 583 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 NOLC1Q14978 699 aaKnown RBP eCLIP15.33■□□□□ 0.04
LIMS1-201ENST00000332345 ZC2HC1CQ53FD0 456 aaPredicted RBP15.33■□□□□ 0.04
LIMS1-201ENST00000332345 STXBP4Q6ZWJ1 553 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 COLGALT2Q8IYK4 626 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 GSTCDQ8NEC7 633 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 IGSF21Q96ID5 467 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 COLEC11Q9BWP8 271 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 NGRNQ9NPE2 291 aaKnown RBP15.33■□□□□ 0.04
LIMS1-201ENST00000332345 TBC1D7Q9P0N9 293 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 ANKFY1Q9P2R3 1169 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 COG5Q9UP83 839 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 EXOC7Q9UPT5 735 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 TRIP11Q15643 1979 aa15.33■□□□□ 0.04
LIMS1-201ENST00000332345 ABLIM1O14639 778 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 GCNT3O95395 438 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 HARSP12081 509 aaKnown RBP15.32■□□□□ 0.04
LIMS1-201ENST00000332345 PFKFB1P16118 471 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 SYKP43405 635 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 OSTNP61366 133 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 ASIC1P78348 528 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 DSC1Q08554 894 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 TCEAL5Q5H9L2 206 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 SLFN12LQ6IEE8 588 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 TMC7Q7Z402 723 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 DDX53Q86TM3 631 aaKnown RBP15.32■□□□□ 0.04
LIMS1-201ENST00000332345 MAP4K3Q8IVH8 894 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 HLA-CQ95604 372 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 ACCSQ96QU6 501 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 GDPD2Q9HCC8 539 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 SERTAD1Q9UHV2 236 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 HPSEQ9Y251 543 aa15.32■□□□□ 0.04
LIMS1-201ENST00000332345 CITO14578 2027 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 FAM237AA0A1B0GTK4 181 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 CSPG5O95196 566 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 CLTAP09496 248 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 AFMP43652 599 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 ERVFC1P60507 584 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 TUSC3Q13454 348 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 POSTNQ15063 836 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 TPRNQ4KMQ1 711 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 ALKAL1Q6UXT8 129 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 TCF25Q9BQ70 676 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 STRA6Q9BX79 667 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 ENTPD7Q9NQZ7 604 aa15.31■□□□□ 0.04
LIMS1-201ENST00000332345 A0A0B4J269 797 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 PVALEFA0A1B0GWK0 134 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 FSD2A1L4K1 749 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 PTGESO14684 152 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 FSCN2O14926 492 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 OGTO15294 1046 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 ACTN4O43707 911 aaKnown RBP15.3■□□□□ 0.04
LIMS1-201ENST00000332345 B4GALT3O60512 393 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 PPP1R37O75864 691 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 CXCL14O95715 111 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 MYL1P05976 194 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 IRS1P35568 1242 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 NDUFA8P51970 172 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 COASYQ13057 564 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 AAK1Q2M2I8 961 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 XKR4Q5GH76 650 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 L1TD1Q5T7N2 865 aaKnown RBP15.3■□□□□ 0.04
LIMS1-201ENST00000332345 UNC13DQ70J99 1090 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.3■□□□□ 0.04
LIMS1-201ENST00000332345 SYCP3Q8IZU3 236 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 VPS52Q8N1B4 723 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 CEP120Q8N960 986 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 FSIP1Q8NA03 581 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 ATXN2LQ8WWM7 1075 aaKnown RBP15.3■□□□□ 0.04
LIMS1-201ENST00000332345 PAGE5Q96GU1 130 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 CCDC34Q96HJ3 373 aa15.3■□□□□ 0.04
LIMS1-201ENST00000332345 IGFLR1Q9H665 355 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms