RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ESYT3A0FGR9 886 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 C5orf58C9J3I9 102 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 SERPINI2O75830 405 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 APOA4P06727 396 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 TXNP10599 105 aaKnown RBP11.17□□□□□ -0.62
CLN8-201ENST00000331222 NCAPHQ15003 741 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 TRIM60Q495X7 471 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 AP1ARQ63HQ0 302 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 TMC4Q7Z404 712 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 H0YC42 278 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 PRKCQQ04759 706 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 CUL3Q13618 768 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 DRAP1Q14919 205 aaPredicted RBP11.17□□□□□ -0.62
CLN8-201ENST00000331222 APOBEC3FQ8IUX4 373 aaKnown RBP11.17□□□□□ -0.62
CLN8-201ENST00000331222 TRIM48Q8IWZ4 208 aa11.17□□□□□ -0.62
CLN8-201ENST00000331222 ENO1P06733 434 aaKnown RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 APRTP07741 180 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 ANKRD49Q8WVL7 239 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 DPF3Q92784 378 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 FAM49BQ9NUQ9 324 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 AFF2P51816 1311 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 KPNA7A9QM74 516 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 PRPF3O43395 683 aaKnown RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 EFCAB14O75071 495 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 ARSEP51690 589 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 SMTNL2Q2TAL5 461 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 FSCBQ5H9T9 825 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 MEI1Q5TIA1 1274 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 ST13P4Q8IZP2 240 aaPredicted RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 TMEM35BQ8NCS4 154 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 DCAF4Q8WV16 495 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 CYP26B1Q9NR63 512 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 IPO5O00410 1097 aaKnown RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 KRT37O76014 449 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 MZF1P28698 734 aaPredicted RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 VN1R5Q7Z5H4 357 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 SLC44A2Q8IWA5 706 aaPredicted RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 NSUN6Q8TEA1 469 aaKnown RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 PNKPQ96T60 521 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 KLK14Q9P0G3 267 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 MARCOQ9UEW3 520 aaPredicted RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 MINPP1Q9UNW1 487 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 ATP10AO60312 1499 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 EMSYQ7Z589 1322 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 DGKIO75912 1065 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 TYK2P29597 1187 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 CYGBQ8WWM9 190 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 MAP4K1Q92918 833 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 CD274Q9NZQ7 290 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 ZNF229Q9UJW7 825 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 DTNAQ9Y4J8 743 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 ATP7AQ04656 1500 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 IKBKBO14920 756 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 MAN1A2O60476 641 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 AVPR1AP37288 418 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 OCA2Q04671 838 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 BTNL9Q6UXG8 535 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 XXYLT1Q8NBI6 393 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 PLEKHA5Q9HAU0 1116 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 PALMDQ9NP74 551 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 LATS2Q9NRM7 1088 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 BSDC1Q9NW68 430 aaPredicted RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 AGO2Q9UKV8 859 aaKnown RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 SKAP2O75563 359 aaPredicted RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 SLC9A1P19634 815 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 YWHABP31946 246 aaKnown RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 ABCD1P33897 745 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 EIF3EP60228 445 aaKnown RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 ADCY2Q08462 1091 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 SDE2Q6IQ49 451 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 ARMC6Q6NXE6 501 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 ZNF614Q8N883 585 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 UBA3Q8TBC4 463 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 TGS1Q96RS0 853 aaKnown RBP11.16□□□□□ -0.62
CLN8-201ENST00000331222 ECT2Q9H8V3 914 aa11.16□□□□□ -0.62
CLN8-201ENST00000331222 KIF28PB7ZC32 967 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 CYTH3O43739 400 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 ARHGEF7Q14155 803 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 ICA1LQ8NDH6 482 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 HASPINQ8TF76 798 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 MAGED4Q96JG8 741 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 TMEM47Q9BQJ4 181 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 ENTPD7Q9NQZ7 604 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 KDSRQ06136 332 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 PRR23CQ6ZRP0 262 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 C17orf80Q9BSJ5 609 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 SHCBP1LQ9BZQ2 653 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 PPIEQ9UNP9 301 aaKnown RBP11.15□□□□□ -0.62
CLN8-201ENST00000331222 CYP26A1O43174 497 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 TAF1CQ15572 869 aaPredicted RBP11.15□□□□□ -0.62
CLN8-201ENST00000331222 ALKBH2Q6NS38 261 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLN8-201ENST00000331222 IFNEQ86WN2 208 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 SPATS2Q86XZ4 545 aaKnown RBP11.15□□□□□ -0.62
CLN8-201ENST00000331222 LINC00301Q8NCQ3 95 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 JADE3Q92613 823 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 RABGGTAQ92696 567 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 SLC24A3Q9HC58 644 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 COPRSQ9NQ92 184 aa11.15□□□□□ -0.62
CLN8-201ENST00000331222 DONSONQ9NYP3 566 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms